Click here to switch to the map view.

The map label for this gene is 88606737

Identifier: 88606737

GI number: 88606737

Start: 1447911

End: 1448342

Strand: Reverse

Name: 88606737

Synonym: APH_1386

Alternate gene names: NA

Gene position: 1448342-1447911 (Counterclockwise)

Preceding gene: 88607064

Following gene: 88607624

Centisome position: 98.44

GC content: 36.34

Gene sequence:

>432_bases
ATGTTTGATATATTTACCAATCCTACAATAACAACTGTGACTATATCGTTTAATCCTGTGCTTTATCCTTATAGTGCCTT
TTTTATGAATGATATATTGGTTGCTGTAGCTGAAATGTCAAACACATCCTGCAATTTAGGATTTGGTACCTTCTGTAATG
ACGTAGAACAACTCCGCACTTTCCGTCGCAATGTGTGCGTAGCAGTCACTAAGTATAGGACTAAAGCCTTAAACGCCGAT
AATGTAGCGCAATACCTTGAAGTTACAGAAACTGTTGAAGATGTTCATTCCCAAAACGCAAGTAAGCATATTTGTGATCT
CATTGCTCATTTAGAGTTAAAGTCTGATGCTGGTAACTACAAGATAGTTCCGACTTCTACAAAATGCTTAGTAACACTGA
AGAGATTTTCAGGGCATAATGTCAAATTATAA

Upstream 100 bases:

>100_bases
ATATCTGGATATACAGTGATTAAGGTATAATTGCTTTGCAAAATTGGAATAATTATTATAAAGTTAAGGACTTTAAATCA
TGCACTGAAAAATCATACGT

Downstream 100 bases:

>100_bases
CATACTCAAAGCGCAGCTTTTGCGCGCTGATTGGCGAAATCACGCCAGCACAACGTCTCTAGTATATTTCTTTCATACTA
GGGTGGTTACCGCACAGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MFDIFTNPTITTVTISFNPVLYPYSAFFMNDILVAVAEMSNTSCNLGFGTFCNDVEQLRTFRRNVCVAVTKYRTKALNAD
NVAQYLEVTETVEDVHSQNASKHICDLIAHLELKSDAGNYKIVPTSTKCLVTLKRFSGHNVKL

Sequences:

>Translated_143_residues
MFDIFTNPTITTVTISFNPVLYPYSAFFMNDILVAVAEMSNTSCNLGFGTFCNDVEQLRTFRRNVCVAVTKYRTKALNAD
NVAQYLEVTETVEDVHSQNASKHICDLIAHLELKSDAGNYKIVPTSTKCLVTLKRFSGHNVKL
>Mature_143_residues
MFDIFTNPTITTVTISFNPVLYPYSAFFMNDILVAVAEMSNTSCNLGFGTFCNDVEQLRTFRRNVCVAVTKYRTKALNAD
NVAQYLEVTETVEDVHSQNASKHICDLIAHLELKSDAGNYKIVPTSTKCLVTLKRFSGHNVKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16021; Mature: 16021

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDIFTNPTITTVTISFNPVLYPYSAFFMNDILVAVAEMSNTSCNLGFGTFCNDVEQLRT
CCCCCCCCEEEEEEEEECCEECHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
FRRNVCVAVTKYRTKALNADNVAQYLEVTETVEDVHSQNASKHICDLIAHLELKSDAGNY
HHHHHEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCE
KIVPTSTKCLVTLKRFSGHNVKL
EEEECCCCEEEEEECCCCCCCCC
>Mature Secondary Structure
MFDIFTNPTITTVTISFNPVLYPYSAFFMNDILVAVAEMSNTSCNLGFGTFCNDVEQLRT
CCCCCCCCEEEEEEEEECCEECHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
FRRNVCVAVTKYRTKALNADNVAQYLEVTETVEDVHSQNASKHICDLIAHLELKSDAGNY
HHHHHEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCE
KIVPTSTKCLVTLKRFSGHNVKL
EEEECCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA