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The map label for this gene is atpH

Identifier: 88606697

GI number: 88606697

Start: 1401260

End: 1401802

Strand: Reverse

Name: atpH

Synonym: APH_1335

Alternate gene names: 88606697

Gene position: 1401802-1401260 (Counterclockwise)

Preceding gene: 88607571

Following gene: 88606923

Centisome position: 95.28

GC content: 47.15

Gene sequence:

>543_bases
GTGAAAGGGCGCGCTGAGTATGTCTACGCGCGTGTCTTAGTGGATTTAGTTAAGGATAATTCGGAAGAAGTTTCCGCGGG
GATCCGTTCGTTGCTTTGTGCATGTGAGGATCGTGACGTGCGTGCGTTTTTTGTAGATCCTACTGTGCCATTTGGAGTGA
AGGTGGCAGCTTTGCGGGATGTTCAAAAGGCGTGTGCGTTGGATGATACTCTGGTGAGCTTTGTCTGTGTTGTGGTAGAG
GACGGATTGTTTGCTAGTCTCGGTGGTATTTTTGAGAAGTTTTTTGCTCTTCTGAGGCGGAAGCTTGGGAAGTTTAATTT
GGAAATAATTTCTGCCGCTCCTTTGACAGAGAAGGAAGAGAGTAAAATATTGCGTATGTTGCGGGCGCAGTATGGTGATC
CTGAGGCCATTATTAGGCGTACGGATCCGGGAATTTTGGGTGGCTTTGTTGCTAAGGGTGACACTTTTACGGTGGATGCC
TCTTACGTGGGGCAGTTACGTGAGCTAACAAGGATTAGTAAGGAAGCTGTTTTTAGTATCTAG

Upstream 100 bases:

>100_bases
GCATACATGCCAAATGGAAACTACTTGACTGGATATGAGGTGTGCGTAATAATACGGCTGGTTTTCCTTATTCGTTGTTT
TGGGCGTTGTGAGGCAGCAA

Downstream 100 bases:

>100_bases
TGATTTATTGGATGAAGCATGAGTGGTGTATCGTCGGGTGAGGTTCTCAAGATTCTTAGAGAGAGAATAGAGAACTTTGG
TGGTCCTGTAAAAGCGGGTA

Product: ATP synthase F1, delta subunit

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MKGRAEYVYARVLVDLVKDNSEEVSAGIRSLLCACEDRDVRAFFVDPTVPFGVKVAALRDVQKACALDDTLVSFVCVVVE
DGLFASLGGIFEKFFALLRRKLGKFNLEIISAAPLTEKEESKILRMLRAQYGDPEAIIRRTDPGILGGFVAKGDTFTVDA
SYVGQLRELTRISKEAVFSI

Sequences:

>Translated_180_residues
MKGRAEYVYARVLVDLVKDNSEEVSAGIRSLLCACEDRDVRAFFVDPTVPFGVKVAALRDVQKACALDDTLVSFVCVVVE
DGLFASLGGIFEKFFALLRRKLGKFNLEIISAAPLTEKEESKILRMLRAQYGDPEAIIRRTDPGILGGFVAKGDTFTVDA
SYVGQLRELTRISKEAVFSI
>Mature_180_residues
MKGRAEYVYARVLVDLVKDNSEEVSAGIRSLLCACEDRDVRAFFVDPTVPFGVKVAALRDVQKACALDDTLVSFVCVVVE
DGLFASLGGIFEKFFALLRRKLGKFNLEIISAAPLTEKEESKILRMLRAQYGDPEAIIRRTDPGILGGFVAKGDTFTVDA
SYVGQLRELTRISKEAVFSI

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPD_ANAPZ (Q2GIG1)

Other databases:

- EMBL:   CP000235
- RefSeq:   YP_505840.1
- ProteinModelPortal:   Q2GIG1
- STRING:   Q2GIG1
- GeneID:   3929970
- GenomeReviews:   CP000235_GR
- KEGG:   aph:APH_1335
- NMPDR:   fig|212042.5.peg.1281
- TIGR:   APH_1335
- HOGENOM:   HBG311259
- ProtClustDB:   CLSK747406
- BioCyc:   APHA212042:APH_1335-MONOMER
- HAMAP:   MF_01416
- InterPro:   IPR000711
- Gene3D:   G3DSA:1.10.520.20
- PANTHER:   PTHR11910
- TIGRFAMs:   TIGR01145

Pfam domain/function: PF00213 OSCP; SSF47928 ATPsynt_OSCP

EC number: 3.6.3.14

Molecular weight: Translated: 19845; Mature: 19845

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGRAEYVYARVLVDLVKDNSEEVSAGIRSLLCACEDRDVRAFFVDPTVPFGVKVAALRD
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHH
VQKACALDDTLVSFVCVVVEDGLFASLGGIFEKFFALLRRKLGKFNLEIISAAPLTEKEE
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHH
SKILRMLRAQYGDPEAIIRRTDPGILGGFVAKGDTFTVDASYVGQLRELTRISKEAVFSI
HHHHHHHHHHCCCHHHHEECCCCCHHHHEEECCCEEEECHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKGRAEYVYARVLVDLVKDNSEEVSAGIRSLLCACEDRDVRAFFVDPTVPFGVKVAALRD
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHH
VQKACALDDTLVSFVCVVVEDGLFASLGGIFEKFFALLRRKLGKFNLEIISAAPLTEKEE
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHH
SKILRMLRAQYGDPEAIIRRTDPGILGGFVAKGDTFTVDASYVGQLRELTRISKEAVFSI
HHHHHHHHHHCCCHHHHEECCCCCHHHHEEECCCEEEECHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA