Definition Methanospirillum hungatei JF-1 chromosome, complete genome.
Accession NC_007796
Length 3,544,738

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 88602972

GI number:

Start: 1926849

End: 1929101

Strand: Direct

Name: Not Available

Synonym: Mhun_1708

Alternate gene names: NA

Gene position: NA

Preceding gene: 88602971

Following gene: 88602974

Centisome position: NA

GC content: NA

Gene sequence:

>2253_bases
ATGGAATATATCTCCCATCCTTTTATTGCTCCGGAGACGATGGAGAAGAGAACATACCAGTTCTCCATCTCCATGAATGC
TCTTGAGAAAAACACCCTTGTTGTCATCCCGACCGGCCTGGGAAAGACAGCAATTGCGCTTATCGTTGCAGCGTCCCGCC
TGTACCAGAACGGGGGGAAGGTGCTGATGATGGCACCGACAAAGCCCCTTGTTGAGCAGCACCTCCGCTATTTCAAGGCA
CATCTTGCCATCCCCGGTGATGAGAAGACGAAATTTGCAATGTTCACCGGTGAGGCATCTCCTGAGAAGCGGACCGCAGA
GTGGATGGCGGCATCGATGGTCCTTGCGACTCCGCAGGTCATTAAGAATGATCTCATCGCCGGCCGGTACGATCTCACCG
ATGTCTCACTCCTGATTGTGGATGAAGGTCACCGCGCAGTCGGAAATTATGCCTATGTCTTCATAGCCGAACGGTATATG
CAGACCGCAAAGGATCCGCTTATCCTTGCGATGACTGCGTCTCCGGGCGGGAACAAGGAGAAGATCTCAGATATCGTGGA
AAATCTGCACATCAAGTCGGTTGAGAGCAGGACTGAGACTGATCCGGATGTCAGGCCTTATGTGCATGAGAAGGATGTGG
AAATAATCCGTGTAGACCTCCCGCCTGAACTAAAAGCGGCTCTTGAAGATTTGAAGGCGCTCGTAGCAGACCGACTTGAT
CAACTCAAGAAAGCCGGGTTTCCGGTCACCGATCAGGCTTCCCTTTCGATGAAAACACTTCAGGAGGTATCGGCAATCAT
CCAGCAAAGAATTGCAGAGCGAGATGCTTCAGGTTTTGCAGCGGCCAGTATTCATGCCGAACTGATGAAACTCAGGCATG
CCATTGGTCTAGCAGAGTCACAGGGCTGTATGGTCCTGAAGGCATACCTCAATAAGCTCCTTGCCGAAGGGAATGCACCT
GGCGGGTCAAAGGCATCAAAGAGAATCGCCTATGATCCCCGGTTCATGAGACTTCTCAACCGATCCATTGAGTGGAAAGA
AGAGTGCCACCCCAAGCTCCTCATCCTCCCTGAGCTGGTACAGTCTATCCTTGATGAGTCCCCAGATACGAGGATCATTG
TCTTTGCAACCTACCGGGATACAGTCAAGATGGTTGTTGATACGCTGCAGGCAGCAGGGATCTCCGCAGAGCGGTTCGTC
GGGAAGGCGAATAAGGACCAGGAAAAAGGACTCTCGCAGAAGAGACAGATTGCAACCATCAGCCGGTTCCGTGAGGGGGA
GTTTTCCGTCCTTGTTGCCACCTCAGTCGGAGAAGAGGGGCTTGATATCCCGTCTACCGACGTGGTCATCTTCTATGAAC
CGGTCCCGTCAGAGATCCGGAGTATCCAGCGAAAGGGAAGAACCGGACGTCATAACACGGGACGGATCATCGTTCTGGTT
ACCAGGAAGACGACTGATGAGACCTTCCAGATTGTTTCCAGAAGACGGGAGAAGGCAATGGTAACGGGGATGAAAAACCT
GACCGGTCATGAGAAGAAGATCCTTCAGACAGCCCTCCCTCTTGACCTGGATGATCTGCAAAAAGCGAAAGCAGCACAGG
AAGAGGTATTTTCTGGTCCAAAGATCATCATCGATGACCGTGAACTGGTCTCAAAGGTGTCAGAGCATCTTTCATCCGCC
GGGGCAGTCATTCGTATCGAACGGCTTTTACAGGGTGATTACAAGATTGGTGACCGTATCCTGGTTGAGCGCAAGACATC
ACGTGATTTTGTTGACAGTCTTATCGACCGGGACCTTCTGGATCAACTGAGAGAGATGGCACGGGTCTGCCCAAAACCGG
TTCTGATCATCGAAGGAGGGGACATCTATTCCCAACGGGACATCCATCCGAATGCTATCCGGGGAGCGCTTGCTGCAATT
TCCGTGACCATGGGGATCGTCATATTTCAGACCAGAGACGCCGGAGATACCGCAGACCTGCTCCTGGTCCTTGCACGCCG
CGAAGAAGAGAACGGATACAAGGAGCGGGGGTCCGGCCAAAAAGAAGCATATGAGAGTCTTGCAACCGCCCAGGAGGCCA
TCATGAGCGCATTTCCAGATCTTGGACCTAAATATGCCCGTGCCCTGCTCACGGCGTTTGGATCACTCAAAGCGATTATT
GATGCAGAAAAAGAAGAGCTCCTCCAGGTCCCAGGTATCGGGGCGAAAAAAGCGGAGATGATTTACGAGTTGTCCCGTCG
TCCATACCCGTAA

Upstream 100 bases:

>100_bases
ACCGGGACAGCATGCAGCAGGTCCGGATTCCAAAGGATCAGCTTGTTGATCTGATCCCAGCCCTTATCAGGGGCAAAAGC
TCATTCTCTTCACTCATCTG

Downstream 100 bases:

>100_bases
AGGAGCAGGGCATATGCTTCAGCCCCTTTTTTAACGGACTCCATAAGGTTCAGGATCCGGGTACTATCCTGTTCTTCGCG
TGCCTGCATAAGGAGGGTCC

Product: Hef nuclease

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>750_residues
MEYISHPFIAPETMEKRTYQFSISMNALEKNTLVVIPTGLGKTAIALIVAASRLYQNGGKVLMMAPTKPLVEQHLRYFKA
HLAIPGDEKTKFAMFTGEASPEKRTAEWMAASMVLATPQVIKNDLIAGRYDLTDVSLLIVDEGHRAVGNYAYVFIAERYM
QTAKDPLILAMTASPGGNKEKISDIVENLHIKSVESRTETDPDVRPYVHEKDVEIIRVDLPPELKAALEDLKALVADRLD
QLKKAGFPVTDQASLSMKTLQEVSAIIQQRIAERDASGFAAASIHAELMKLRHAIGLAESQGCMVLKAYLNKLLAEGNAP
GGSKASKRIAYDPRFMRLLNRSIEWKEECHPKLLILPELVQSILDESPDTRIIVFATYRDTVKMVVDTLQAAGISAERFV
GKANKDQEKGLSQKRQIATISRFREGEFSVLVATSVGEEGLDIPSTDVVIFYEPVPSEIRSIQRKGRTGRHNTGRIIVLV
TRKTTDETFQIVSRRREKAMVTGMKNLTGHEKKILQTALPLDLDDLQKAKAAQEEVFSGPKIIIDDRELVSKVSEHLSSA
GAVIRIERLLQGDYKIGDRILVERKTSRDFVDSLIDRDLLDQLREMARVCPKPVLIIEGGDIYSQRDIHPNAIRGALAAI
SVTMGIVIFQTRDAGDTADLLLVLARREEENGYKERGSGQKEAYESLATAQEAIMSAFPDLGPKYARALLTAFGSLKAII
DAEKEELLQVPGIGAKKAEMIYELSRRPYP

Sequences:
NA

Specific function: NA

COG id: COG1111

COG function: function code L; ERCC4-like helicases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA