Definition Methanospirillum hungatei JF-1 chromosome, complete genome.
Accession NC_007796
Length 3,544,738

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Identifier: 88601852

GI number:

Start: 633843

End: 637292

Strand: Direct

Name: Not Available

Synonym: Mhun_0551

Alternate gene names: NA

Gene position: NA

Preceding gene: 88601851

Following gene: 88601855

Centisome position: NA

GC content: NA

Gene sequence:

>3450_bases
ATGGCAGCAACCCCCCGTCAACTTGAGGCAATCTCACGGCATGATGTCAGCATGGTGGTTACTGCCGGAGCAGGAACCGG
TAAGACCTTTGTCCTGGTAGAAAAGTATCTGAACCTGGTTCAGGACCAGGGATATCGCATCAGGGATGTTCTTGCTCTTA
CCTTCACCGATAAGGCTGCGGCAGAGATGAAGGAGCGGGTCAGAAAGACCATTGCAGAACGACTCAAAGATGATCCTGAC
AATCAGGTCTGGAAGGATGCACACGAAGAGCTTGTCATTGCACCGGTTATGACATTTCATTCCTTCTGTGCTCAGATTCT
CCGGGAATTTGCCATTGAAGCAGGGCTTGACCCGGGTTTTGTGATCCTTGATGAGGGGCAGGCACTGGCTGTAGAACGGG
AAGCATTTGAAACCCTCATTAGAAAACCTCCGGAAGAGATACAGGAATCACTTATCCGGCTTCTCGCACAGATTGAAAAA
TTCCAGGTCAATCAGATCATGACAACGCTCGCTAAAAATACCGACGCATTTTTACAGTTTGCAGAGGACCTGGCAGGAGA
TCCGGATGGAATCATCAATGCATGGGAGATTTTTTTAGAACAGGTCAGAACCCCGGTTATAAATCAGTTTTTCGCTGACA
CGGATATTAGAGATGCAATTTCAGATTTCATCAGATTTGAAGAGGTATATAGAAACAAGGATGATCGTGCAGTCCGGTAT
TTACAGCAGGTCTGTCCTTATCTGTATGATCTCACTCCTGATGCCCCACCTGAAACGTTGCATAAAGCAGCGGAAGAATT
TCTAAAAATTCGTCCGACCGGTAAACTGGGGTCACAAAAAATATGGGACAATGATGACTTAATCCGGTTTCGTGAAGCGA
AAACCTGCCTTATCGAAAACCTTGAAAAAGCAGTTCCATTTTTCTCCCTGTATATCGATAAAGATTCACGATTTACTGCA
TCAACCATCACGTTCTTTAGGGATCTGGCTCTCGTGGCAGGATATTACTTCGACCTTTTACACATGCTGAAAAGGCAGGC
AAACGGAGTTGATTTCAATGATCTCATCCAGTTGACCCGGGAATTTCTGCAATCCCATCAGGATATCGTTGCACGGCATA
TCAGACCACGGTATCAGTATATTCTGGTTGATGAATTCCAGGACACCGACCCTGCTCAATTTGAAATAATTACTGCTATT
ATTGGTGAATTACAACCAGGAACGCGAAGCCTCTTCATCGTCGGTGATCCCAAGCAGTCGATTTACCTGTTCCGGAATGC
GGATGTGACACGGTTTAAAGAAGCTCAGACCCGTATTCTTTCCGATTGCAAGGGAAATCTCATCAATCTGGATACGAGTT
TTCGAAGTTGCCGGGAGGTTATCGGATGTGTCAATTATCTCTTCTCCCGAATCTTTGCATCAACCGAAAAGCCCTGGGAG
TTTGGATATGAACCAATTCAGGTCTGCGATGACCGAAAAGCATCACCGGGTTCGATTACCGTTCTGCTTCCTGGAAAGGC
ACCAAAAGGGAGTGAACGATCAGAAACAAAGGAGATAGAAGCAGGAATGGTGGCAGATCTTGTTCATCAGATCGTCTCAT
GCGGTTCATTTCAAATTACCGACCGGGACGGGGTAATGCGACCGGCCGGATATGGAGATATCGCAATTCTTATTGAGCGA
CGGACTCATCTTACCCGGTATACGACCGCTCTTTCCAGAAAAGAGACACCTTTTTATGTCCATGGGGGGATTGGATTCTA
CTCCCGGCAGGAGATCTATGATATCTATAATATTCTCTCGTTCCTCTTACGGCCCTATGATAGTGCTGCACTTTTCGGTG
TCCTTCGGTCCCCTTATTTCAGCTTCTCTGATCCGCTGATCTATCATATCCTTAACGTTCCTGGAGCGAAACGAAGATGG
AGCCTGTATGAGAAGTTAAGAGCCTGTGCTGAACGATTCTGTACCCGCCCCTCTGAAATAGAACCATCAGCGGAGATCCT
TTCCTGCTCACCTGCTGACCAGGAGCTCATTCTCCGTGCAGCCCGGTTGCTTGAATCATGGAGAAACCTGGCCGGGAGAG
AGCCGGTGGTGCCTTTGGTAAACCGCATTATACGAGAATCCGGCATTCTTACTATCTATGGTGCATTAGAGCAGGGTGAA
CAACAGGCTGCAAATCTGACAAAACTTCTTGGAATCATCCGGGGGAGAACAGAGGGAGGATACTATAGTTTATTTGATCT
GGTACAGGACATGATGATCTCTATCGCCGATGAGGAACGGGAAGGGGAGGCTGCACTTGATACCCTCTCGAAGACATCGG
TGAATATTATGACCGTGCATGCCGCGAAGGGTCTTGAATTCCCTGTCGTCATACTTCCTGACATGGGTTCATCACGAGAA
GGAAAACTGGGCCCCATACTTTCCGGTGATCATCCTCATCTCTATGGGGTCAGGATTCCGGATCCTGATCAGGATTTTGA
TATCAAAGAAACTCCGGTCTATACTGCATTGTCGCTTATTCAGAAAGAAAAGGAATCGGCTGAGCGAAAACGACTCTTCT
ATGTCGGAGCCACGAGAGCCAGGGATCATCTTGTTCTCTGTGGGAAACAACCTGATAAATTCTATGAATCGGTTGATAAG
AGTAATAACAGGATTGACTGGGTGTGCACGCTCTTTGGGATAACAAAGGACATTGCAGAAGAAGGGGGCGTTATTAGCAT
TGATCCGGAAGATGGCGGAAAACCTATAGATATTACCATCCTGACCGATCCTGATCAACTGACCCGGATGTGGGCACAGG
AAGCACTTCCTCCTCTTACCCTTCCAGATGAGTATGCCAAGTTGTCCGGAACCAGAAAACGTGGTCTTTACTCGGATATG
CCTGATGAAAAAGCCACGATCAGACCTGTTCCGGTGACCGATATAGGACTATTGGGAAAAGCGACCGGGCATGAAGAGAC
TATTCATCAGGTCACGATTCCTGGTGGCTCTCATCTCCTGCCTGATGAGATTGGAACCCTGCTTCATCATATCTTTTCAG
GAAAGGATACAAAATCAGTACTTGTCTCGTATGGTATCACAAGTCCTGAAGCAGAGTCCTTTTGTAATACCTTATATCAG
CGGTTTTGCAGCACTCCCCTCATTCGCGATGCAGTTCGTTCATTCCAGGAAGTCTCCTTTATAACCTATTCAGGGAATTT
TCCGGTTACCGGACGTATTGACCGGCTGATTCAGGACAGCAGAAATGAATGGGCTGTTATTGATTATAAATCTGGAGACA
AGACCGGTGCAGAACTGCAACTGAATGTATACCGGATCGCAGCAGAGGTACTCACCGGCCAGCCGGTCAGAATGTTCCTT
TATTCTATGAAAACCGGAGAGTTTACAGAGCCCCGCTTTCTTTCTGATGAAGAGATACATGTAGCTCTCAAAAGATATCT
GGGAAAATAA

Upstream 100 bases:

>100_bases
AAACCATATGCAGGTTCCAGCCAGACAGGGGTTCACAGCTGGGAGAATGGTACCGGTATCCCTCTGTATCTGATGTATGT
TTAGAGGAGGCTGAGGCATA

Downstream 100 bases:

>100_bases
CCCCTTTCTCCAGATTGAGGTTCATCTTCCGTAAATTTTTACCAGTTCTGAGAGCCGCCTGGAGAGTTCTTCTGATATCA
TCCTCTCCTGTAACCGCCAT

Product: UvrD/REP helicase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1149_residues
MAATPRQLEAISRHDVSMVVTAGAGTGKTFVLVEKYLNLVQDQGYRIRDVLALTFTDKAAAEMKERVRKTIAERLKDDPD
NQVWKDAHEELVIAPVMTFHSFCAQILREFAIEAGLDPGFVILDEGQALAVEREAFETLIRKPPEEIQESLIRLLAQIEK
FQVNQIMTTLAKNTDAFLQFAEDLAGDPDGIINAWEIFLEQVRTPVINQFFADTDIRDAISDFIRFEEVYRNKDDRAVRY
LQQVCPYLYDLTPDAPPETLHKAAEEFLKIRPTGKLGSQKIWDNDDLIRFREAKTCLIENLEKAVPFFSLYIDKDSRFTA
STITFFRDLALVAGYYFDLLHMLKRQANGVDFNDLIQLTREFLQSHQDIVARHIRPRYQYILVDEFQDTDPAQFEIITAI
IGELQPGTRSLFIVGDPKQSIYLFRNADVTRFKEAQTRILSDCKGNLINLDTSFRSCREVIGCVNYLFSRIFASTEKPWE
FGYEPIQVCDDRKASPGSITVLLPGKAPKGSERSETKEIEAGMVADLVHQIVSCGSFQITDRDGVMRPAGYGDIAILIER
RTHLTRYTTALSRKETPFYVHGGIGFYSRQEIYDIYNILSFLLRPYDSAALFGVLRSPYFSFSDPLIYHILNVPGAKRRW
SLYEKLRACAERFCTRPSEIEPSAEILSCSPADQELILRAARLLESWRNLAGREPVVPLVNRIIRESGILTIYGALEQGE
QQAANLTKLLGIIRGRTEGGYYSLFDLVQDMMISIADEEREGEAALDTLSKTSVNIMTVHAAKGLEFPVVILPDMGSSRE
GKLGPILSGDHPHLYGVRIPDPDQDFDIKETPVYTALSLIQKEKESAERKRLFYVGATRARDHLVLCGKQPDKFYESVDK
SNNRIDWVCTLFGITKDIAEEGGVISIDPEDGGKPIDITILTDPDQLTRMWAQEALPPLTLPDEYAKLSGTRKRGLYSDM
PDEKATIRPVPVTDIGLLGKATGHEETIHQVTIPGGSHLLPDEIGTLLHHIFSGKDTKSVLVSYGITSPEAESFCNTLYQ
RFCSTPLIRDAVRSFQEVSFITYSGNFPVTGRIDRLIQDSRNEWAVIDYKSGDKTGAELQLNVYRIAAEVLTGQPVRMFL
YSMKTGEFTEPRFLSDEEIHVALKRYLGK

Sequences:
NA

Specific function: NA

COG id: COG1074

COG function: function code L; ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA