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The map label for this gene is yhgC [H]

Identifier: 88196557

GI number: 88196557

Start: 2696711

End: 2697154

Strand: Reverse

Name: yhgC [H]

Synonym: SAOUHSC_02930

Alternate gene names: 88196557

Gene position: 2697154-2696711 (Counterclockwise)

Preceding gene: 88196558

Following gene: 88196556

Centisome position: 95.6

GC content: 31.08

Gene sequence:

>444_bases
ATGAAAATTTATGATGAATATAGAAGTTATGTAATAGAAGAACTGGATGATTGTCTCACAATACAAAAAAATAATGACAC
TGCATATTACGATGTGCTAGAAGCGATAAATGATTTATCAAATGATTCATTATGTGTGTTAAATCATTTATATATTAACG
AAGGACAAGAAGAAACATTCGAGCAAAAATTTTTGCGACGTAATAAGCATTTAAAAAACGTTGATGGATTTAAAGCATTA
AGGTTTTTAAGACCTAGAACAGCTGGTAGACACTATATCATTATTACGCTGTGGGAAAATAGGCAAGCATTTTATCATTG
GCAAAATTCAGCTGAGTACAAGCATACACACAAGCATCGTGGCACTTCGAAAGGTGCAGATGTAAAAATAATTAATCGTG
AATTATCATACAATATTCGTATTGAATTAGCTGATATGGTCTAG

Upstream 100 bases:

>100_bases
AGAAGCCAAACTATGATTGTAATTAATAAATACGGGAATGAATTAGTAATAGATATAAAGTAATATGACCAAAAATATAA
ATGAAATGAAGGCATTTATT

Downstream 100 bases:

>100_bases
CCCGAGATATCAACCCTCAATCATTTGAAAGTCCTTGAATGCTACGTCATGTCAAAGTGTAGTGTCGAGGACTTTGGTAT
TTAACCCTATTTAATTGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MKIYDEYRSYVIEELDDCLTIQKNNDTAYYDVLEAINDLSNDSLCVLNHLYINEGQEETFEQKFLRRNKHLKNVDGFKAL
RFLRPRTAGRHYIIITLWENRQAFYHWQNSAEYKHTHKHRGTSKGADVKIINRELSYNIRIELADMV

Sequences:

>Translated_147_residues
MKIYDEYRSYVIEELDDCLTIQKNNDTAYYDVLEAINDLSNDSLCVLNHLYINEGQEETFEQKFLRRNKHLKNVDGFKAL
RFLRPRTAGRHYIIITLWENRQAFYHWQNSAEYKHTHKHRGTSKGADVKIINRELSYNIRIELADMV
>Mature_147_residues
MKIYDEYRSYVIEELDDCLTIQKNNDTAYYDVLEAINDLSNDSLCVLNHLYINEGQEETFEQKFLRRNKHLKNVDGFKAL
RFLRPRTAGRHYIIITLWENRQAFYHWQNSAEYKHTHKHRGTSKGADVKIINRELSYNIRIELADMV

Specific function: Unknown

COG id: COG2329

COG function: function code R; Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007138
- InterPro:   IPR011008 [H]

Pfam domain/function: PF03992 ABM [H]

EC number: NA

Molecular weight: Translated: 17615; Mature: 17615

Theoretical pI: Translated: 7.21; Mature: 7.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIYDEYRSYVIEELDDCLTIQKNNDTAYYDVLEAINDLSNDSLCVLNHLYINEGQEETF
CCCHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHH
EQKFLRRNKHLKNVDGFKALRFLRPRTAGRHYIIITLWENRQAFYHWQNSAEYKHTHKHR
HHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEECCCEEEEEECCCCCCHHHHHHC
GTSKGADVKIINRELSYNIRIELADMV
CCCCCCCEEEEEEECCEEEEEEEECCC
>Mature Secondary Structure
MKIYDEYRSYVIEELDDCLTIQKNNDTAYYDVLEAINDLSNDSLCVLNHLYINEGQEETF
CCCHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHH
EQKFLRRNKHLKNVDGFKALRFLRPRTAGRHYIIITLWENRQAFYHWQNSAEYKHTHKHR
HHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEECCCEEEEEECCCCCCHHHHHHC
GTSKGADVKIINRELSYNIRIELADMV
CCCCCCCEEEEEEECCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8335642; 9579061; 9384377 [H]