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The map label for this gene is ydfJ [H]

Identifier: 88196497

GI number: 88196497

Start: 2638640

End: 2641108

Strand: Reverse

Name: ydfJ [H]

Synonym: SAOUHSC_02866

Alternate gene names: 88196497

Gene position: 2641108-2638640 (Counterclockwise)

Preceding gene: 88196499

Following gene: 88196496

Centisome position: 93.61

GC content: 33.7

Gene sequence:

>2469_bases
ATGGGGACATTCATCGCAAAACATAAATGGTCCGCGGTCATTGCATGGATAGTGATTGTAGCTGCAATATTGATACCACT
TGCTACAAATGCACCGAAATTTGACAATGATATTAAAATGACAGGATTAGAGTCGTTAGATACGAATAAAAAGATTGAAA
AACATTTTAATCAAGATAGTGAAAAGGCACAAATACGTGTTGTCTTTAAGACGACTAAAGATGATGGTATTGTGCAACCG
AACATTACTAAAGATATTAAGAAAACGTTAGATGATATTAAAAAAGATGACAAGCACATTGATAAAATATCAGATCCTTA
TGAAAATAAGCAAATTAGTAAAGATAAAACAACTGCATTTGCAGATATCACATATGACGTTAGTCAAACATCTTTAAAAG
ATGGCTCTAGAGATAATGTTAAAAGTCATTTGAAAGACTTACGTGACAATCATAATGTACAAACAGAGTTAACTGGTACA
GGAATGACATCTACAGAAGTAGGCGGTAATTCTGAACTAGTTGGTATTATTGTTGCATTTGTTGTACTGTTAATCACATT
CGGTTCAGTCATTGCTGCAGGATTACCAATTATAAGTGCATTGATTGGTCTAGCCTCTGGTGTAGGTATTATCAGTTTGT
TAACTTATGCATTCGATATACCAAATGTCACACTGACATTAGCCGTAATGATTGGACTAGCAGTTGGTATCGATTATGCA
TTATTTATTTTATTCAGATATCGACAAGTTATGAAAACTGAAACAGATTACATTAAAGGCATTGGTCTTGCAATAGGAAC
AGCAGGTAGTGCAGTTGTTTTTGCTGGTGTAACAGTTGTAATTGCAGTATGTGGTTTATCATTAGTAGGCATTGACTTCT
TAGCGGTAATGGGATTTGCTTCGGCAATTAGTGTTGTTTTTGCAGTACTTAGCGCTTTAACTTTATTACCTGCATTAATA
AGCATTTTCCATAAACGCATTAAAGTGAATAAATTACAGTCTAAATTCAAAAAAGATATTGATACGCCATGGTCTAAATT
TATTACAGGAAATGCACTTGCGGCAGTATTACTAGGTTTAATCATATTAGTAGCAGCTGCAATACCAGTTAGTCATATGC
GACTTGGTATTCCAGATGACGGTGTTAAACCAGCAGATTCTACACAGAAAAAAGCTTACGATATTATCTCGGATAAATTT
GGTGAAGGATTTAATGGCCAAATACCGATGTTGATAAATGTGAAAGATAAAAAGGATGATCCACAAGGATTACAACAAGA
TTTACAGTCTGTATATAAAGATATTAAAGATAAGAAAAATGTAGATATCGTTACGCCACCACAAATGAGTAAAGATAATG
ATTACGCTTTGATGGTCGTGATACCTAAGCAAGGGCCTAATGCAGAGAGTACAAATGATTTAGTGCATGATTTACGAGAT
TATCATAAAGATGCACAAGATAAATATGGGTTCAAAACGGAGATTTCGGGACAAAGTGTCATTAATATTGATATGTCTAA
AAAGTTAAATGAGGCGATACCTTTATTTGCCTCAGTCATTGTTGTATTAGCATTTTTCTTATTAATGATTGTCTTCCGTT
CAATTCTAATACCATTAAAAGCAGTTTTAGGATTCGTCTTGTCATTAATGGCAACATTAGGATTTACAACATTAGTAATG
CAAGATGGTTTTATGAAAGGTCTGTTTGGTATTGAAACGACAGGACCAATGCTAGCATTTTTACCGGTTATTACTATAGG
TATCTTATTTGGATTAGCGATGGATTATGAAGTCTTCCTTATGTCGCGAATTCATGAAGAATATAGTAAAACAGGGGATA
ATGATTATTCTATCAAAGTAGGATTGAAAGAAAGCGGTCCTGTTATTGTAGCAGCTGCATTAATTATGTTTAGTGTCTTC
TTTGCGTTTGTATTCCAAGAAGATGTCATGATTAAATCAATGGGTATGGCATTAGCGTTTGGTGTACTCTTTGATGCCTT
CGTAGTCAGAATGATGTTAATTCCTGCATTAACGAAATTGTTTGGAAAAGGTTCGTGGTATTTACCAGCATGGTTGAATC
GCATTATTCCACGAGTTGATATTGAAGGACATGCACTTGAAAAATATAAAACGGTTGAATCACAGGAATCTGAAGCTAAA
GATAGTAAGGAAACATACGACACAACCTTTAAAGTATATCCACAAGGTGCAACAAATGTATCGAAACATCAAGATGCACA
TGGGCAAGATGATGCACATTCAATAGTACTAGATGATAAAACGATGGCATTGTACCAAGAAGTGAAACAGCAATCAGCAA
GTTCATTGTTCTTATATGATGCTTTAATAGATTATCAAAACAAGCATCAACTAAATTCAAAACAACAAGCAACGAATATA
GAACAGTTGAATAAAAATATTGAAAAGCTCAATCAATTGTTAGAAAAAAATCTACGAAATAAATCATAA

Upstream 100 bases:

>100_bases
GGATAGATACTATAATCGAACAATAATCTACACTGTATATTTAAACTATAACGTTGATTTTAAAAGGAGGCAATATACTT
TGGCAAAATTTTTATATAAG

Downstream 100 bases:

>100_bases
AATAACATGTACATGCCTCCGCTTTAAATGTCTATCAATGACATTTGAAGCGGAGGTTTTTTGCATGGAAGTGATTATAC
AAAACATTTTTGCAATGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 822; Mature: 821

Protein sequence:

>822_residues
MGTFIAKHKWSAVIAWIVIVAAILIPLATNAPKFDNDIKMTGLESLDTNKKIEKHFNQDSEKAQIRVVFKTTKDDGIVQP
NITKDIKKTLDDIKKDDKHIDKISDPYENKQISKDKTTAFADITYDVSQTSLKDGSRDNVKSHLKDLRDNHNVQTELTGT
GMTSTEVGGNSELVGIIVAFVVLLITFGSVIAAGLPIISALIGLASGVGIISLLTYAFDIPNVTLTLAVMIGLAVGIDYA
LFILFRYRQVMKTETDYIKGIGLAIGTAGSAVVFAGVTVVIAVCGLSLVGIDFLAVMGFASAISVVFAVLSALTLLPALI
SIFHKRIKVNKLQSKFKKDIDTPWSKFITGNALAAVLLGLIILVAAAIPVSHMRLGIPDDGVKPADSTQKKAYDIISDKF
GEGFNGQIPMLINVKDKKDDPQGLQQDLQSVYKDIKDKKNVDIVTPPQMSKDNDYALMVVIPKQGPNAESTNDLVHDLRD
YHKDAQDKYGFKTEISGQSVINIDMSKKLNEAIPLFASVIVVLAFFLLMIVFRSILIPLKAVLGFVLSLMATLGFTTLVM
QDGFMKGLFGIETTGPMLAFLPVITIGILFGLAMDYEVFLMSRIHEEYSKTGDNDYSIKVGLKESGPVIVAAALIMFSVF
FAFVFQEDVMIKSMGMALAFGVLFDAFVVRMMLIPALTKLFGKGSWYLPAWLNRIIPRVDIEGHALEKYKTVESQESEAK
DSKETYDTTFKVYPQGATNVSKHQDAHGQDDAHSIVLDDKTMALYQEVKQQSASSLFLYDALIDYQNKHQLNSKQQATNI
EQLNKNIEKLNQLLEKNLRNKS

Sequences:

>Translated_822_residues
MGTFIAKHKWSAVIAWIVIVAAILIPLATNAPKFDNDIKMTGLESLDTNKKIEKHFNQDSEKAQIRVVFKTTKDDGIVQP
NITKDIKKTLDDIKKDDKHIDKISDPYENKQISKDKTTAFADITYDVSQTSLKDGSRDNVKSHLKDLRDNHNVQTELTGT
GMTSTEVGGNSELVGIIVAFVVLLITFGSVIAAGLPIISALIGLASGVGIISLLTYAFDIPNVTLTLAVMIGLAVGIDYA
LFILFRYRQVMKTETDYIKGIGLAIGTAGSAVVFAGVTVVIAVCGLSLVGIDFLAVMGFASAISVVFAVLSALTLLPALI
SIFHKRIKVNKLQSKFKKDIDTPWSKFITGNALAAVLLGLIILVAAAIPVSHMRLGIPDDGVKPADSTQKKAYDIISDKF
GEGFNGQIPMLINVKDKKDDPQGLQQDLQSVYKDIKDKKNVDIVTPPQMSKDNDYALMVVIPKQGPNAESTNDLVHDLRD
YHKDAQDKYGFKTEISGQSVINIDMSKKLNEAIPLFASVIVVLAFFLLMIVFRSILIPLKAVLGFVLSLMATLGFTTLVM
QDGFMKGLFGIETTGPMLAFLPVITIGILFGLAMDYEVFLMSRIHEEYSKTGDNDYSIKVGLKESGPVIVAAALIMFSVF
FAFVFQEDVMIKSMGMALAFGVLFDAFVVRMMLIPALTKLFGKGSWYLPAWLNRIIPRVDIEGHALEKYKTVESQESEAK
DSKETYDTTFKVYPQGATNVSKHQDAHGQDDAHSIVLDDKTMALYQEVKQQSASSLFLYDALIDYQNKHQLNSKQQATNI
EQLNKNIEKLNQLLEKNLRNKS
>Mature_821_residues
GTFIAKHKWSAVIAWIVIVAAILIPLATNAPKFDNDIKMTGLESLDTNKKIEKHFNQDSEKAQIRVVFKTTKDDGIVQPN
ITKDIKKTLDDIKKDDKHIDKISDPYENKQISKDKTTAFADITYDVSQTSLKDGSRDNVKSHLKDLRDNHNVQTELTGTG
MTSTEVGGNSELVGIIVAFVVLLITFGSVIAAGLPIISALIGLASGVGIISLLTYAFDIPNVTLTLAVMIGLAVGIDYAL
FILFRYRQVMKTETDYIKGIGLAIGTAGSAVVFAGVTVVIAVCGLSLVGIDFLAVMGFASAISVVFAVLSALTLLPALIS
IFHKRIKVNKLQSKFKKDIDTPWSKFITGNALAAVLLGLIILVAAAIPVSHMRLGIPDDGVKPADSTQKKAYDIISDKFG
EGFNGQIPMLINVKDKKDDPQGLQQDLQSVYKDIKDKKNVDIVTPPQMSKDNDYALMVVIPKQGPNAESTNDLVHDLRDY
HKDAQDKYGFKTEISGQSVINIDMSKKLNEAIPLFASVIVVLAFFLLMIVFRSILIPLKAVLGFVLSLMATLGFTTLVMQ
DGFMKGLFGIETTGPMLAFLPVITIGILFGLAMDYEVFLMSRIHEEYSKTGDNDYSIKVGLKESGPVIVAAALIMFSVFF
AFVFQEDVMIKSMGMALAFGVLFDAFVVRMMLIPALTKLFGKGSWYLPAWLNRIIPRVDIEGHALEKYKTVESQESEAKD
SKETYDTTFKVYPQGATNVSKHQDAHGQDDAHSIVLDDKTMALYQEVKQQSASSLFLYDALIDYQNKHQLNSKQQATNIE
QLNKNIEKLNQLLEKNLRNKS

Specific function: Unknown

COG id: COG2409

COG function: function code R; Predicted drug exporters of the RND superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mmpL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004869
- InterPro:   IPR000731 [H]

Pfam domain/function: PF03176 MMPL [H]

EC number: NA

Molecular weight: Translated: 90410; Mature: 90279

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: PS50156 SSD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTFIAKHKWSAVIAWIVIVAAILIPLATNAPKFDNDIKMTGLESLDTNKKIEKHFNQDS
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCHHCCCCHHHHHHCCCCC
EKAQIRVVFKTTKDDGIVQPNITKDIKKTLDDIKKDDKHIDKISDPYENKQISKDKTTAF
CCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEE
ADITYDVSQTSLKDGSRDNVKSHLKDLRDNHNVQTELTGTGMTSTEVGGNSELVGIIVAF
EEEEECCHHHHCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHH
VVLLITFGSVIAAGLPIISALIGLASGVGIISLLTYAFDIPNVTLTLAVMIGLAVGIDYA
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
LFILFRYRQVMKTETDYIKGIGLAIGTAGSAVVFAGVTVVIAVCGLSLVGIDFLAVMGFA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAISVVFAVLSALTLLPALISIFHKRIKVNKLQSKFKKDIDTPWSKFITGNALAAVLLGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHH
IILVAAAIPVSHMRLGIPDDGVKPADSTQKKAYDIISDKFGEGFNGQIPMLINVKDKKDD
HHHHHHHCCHHHHEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCC
PQGLQQDLQSVYKDIKDKKNVDIVTPPQMSKDNDYALMVVIPKQGPNAESTNDLVHDLRD
HHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHH
YHKDAQDKYGFKTEISGQSVINIDMSKKLNEAIPLFASVIVVLAFFLLMIVFRSILIPLK
HHHCHHHCCCCEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVLGFVLSLMATLGFTTLVMQDGFMKGLFGIETTGPMLAFLPVITIGILFGLAMDYEVFL
HHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
MSRIHEEYSKTGDNDYSIKVGLKESGPVIVAAALIMFSVFFAFVFQEDVMIKSMGMALAF
HHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVLFDAFVVRMMLIPALTKLFGKGSWYLPAWLNRIIPRVDIEGHALEKYKTVESQESEAK
HHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
DSKETYDTTFKVYPQGATNVSKHQDAHGQDDAHSIVLDDKTMALYQEVKQQSASSLFLYD
CCHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCHHHHHH
ALIDYQNKHQLNSKQQATNIEQLNKNIEKLNQLLEKNLRNKS
HHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GTFIAKHKWSAVIAWIVIVAAILIPLATNAPKFDNDIKMTGLESLDTNKKIEKHFNQDS
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCHHCCCCHHHHHHCCCCC
EKAQIRVVFKTTKDDGIVQPNITKDIKKTLDDIKKDDKHIDKISDPYENKQISKDKTTAF
CCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEE
ADITYDVSQTSLKDGSRDNVKSHLKDLRDNHNVQTELTGTGMTSTEVGGNSELVGIIVAF
EEEEECCHHHHCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHH
VVLLITFGSVIAAGLPIISALIGLASGVGIISLLTYAFDIPNVTLTLAVMIGLAVGIDYA
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
LFILFRYRQVMKTETDYIKGIGLAIGTAGSAVVFAGVTVVIAVCGLSLVGIDFLAVMGFA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAISVVFAVLSALTLLPALISIFHKRIKVNKLQSKFKKDIDTPWSKFITGNALAAVLLGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHH
IILVAAAIPVSHMRLGIPDDGVKPADSTQKKAYDIISDKFGEGFNGQIPMLINVKDKKDD
HHHHHHHCCHHHHEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCC
PQGLQQDLQSVYKDIKDKKNVDIVTPPQMSKDNDYALMVVIPKQGPNAESTNDLVHDLRD
HHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHH
YHKDAQDKYGFKTEISGQSVINIDMSKKLNEAIPLFASVIVVLAFFLLMIVFRSILIPLK
HHHCHHHCCCCEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVLGFVLSLMATLGFTTLVMQDGFMKGLFGIETTGPMLAFLPVITIGILFGLAMDYEVFL
HHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
MSRIHEEYSKTGDNDYSIKVGLKESGPVIVAAALIMFSVFFAFVFQEDVMIKSMGMALAF
HHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVLFDAFVVRMMLIPALTKLFGKGSWYLPAWLNRIIPRVDIEGHALEKYKTVESQESEAK
HHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
DSKETYDTTFKVYPQGATNVSKHQDAHGQDDAHSIVLDDKTMALYQEVKQQSASSLFLYD
CCHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCHHHHHH
ALIDYQNKHQLNSKQQATNIEQLNKNIEKLNQLLEKNLRNKS
HHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]