Click here to switch to the map view.

The map label for this gene is 88196335

Identifier: 88196335

GI number: 88196335

Start: 2478589

End: 2478939

Strand: Reverse

Name: 88196335

Synonym: SAOUHSC_02695

Alternate gene names: NA

Gene position: 2478939-2478589 (Counterclockwise)

Preceding gene: 88196337

Following gene: 88196334

Centisome position: 87.86

GC content: 30.2

Gene sequence:

>351_bases
GTGGCGACGGTATTATTATTACTAGTCTTTATATCAGGATGTGGTAATGATAAATATGTGAAAGAAATAGATGAAGCAGT
TAAAATTCAAAATCAAAAACAAGAACAACTTGCCAAAAAAGGCAACGGTGATCGTGTTGATCATTTTGAACGCAAAGATG
CTAATATTTATGTCTATGATAAGGATAAAATTATCATTTTAGCTTATAAACCTTTGAGTAATGATGATGAAGTGCATTAT
TATGCATATGATTTTAGTGATAAACGTGTATCATATAAGCAAGATTTTGATTCGAGACGATATTATCAACAACATGATGC
GGATTATCATGAAGAAAATATGACGAACTAG

Upstream 100 bases:

>100_bases
GTAGTAGTTGTAGCGCATTAATGTTTGACGGTGTATAGTATTAATTATATTGAAAGTTAGTTGGAAGTTGATAGTAGGAG
TGGGAGCATTGAAGCGATTT

Downstream 100 bases:

>100_bases
ATATGAATAGGAGTTATTATGACTAAAAAATTACTAACATTATTTATAGTGAGCATGTTAATTTTAACAGCTTGCGGTAA
AAAAGAATCAGCAACGACAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MATVLLLLVFISGCGNDKYVKEIDEAVKIQNQKQEQLAKKGNGDRVDHFERKDANIYVYDKDKIIILAYKPLSNDDEVHY
YAYDFSDKRVSYKQDFDSRRYYQQHDADYHEENMTN

Sequences:

>Translated_116_residues
MATVLLLLVFISGCGNDKYVKEIDEAVKIQNQKQEQLAKKGNGDRVDHFERKDANIYVYDKDKIIILAYKPLSNDDEVHY
YAYDFSDKRVSYKQDFDSRRYYQQHDADYHEENMTN
>Mature_115_residues
ATVLLLLVFISGCGNDKYVKEIDEAVKIQNQKQEQLAKKGNGDRVDHFERKDANIYVYDKDKIIILAYKPLSNDDEVHYY
AYDFSDKRVSYKQDFDSRRYYQQHDADYHEENMTN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13798; Mature: 13667

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATVLLLLVFISGCGNDKYVKEIDEAVKIQNQKQEQLAKKGNGDRVDHFERKDANIYVYD
CHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEE
KDKIIILAYKPLSNDDEVHYYAYDFSDKRVSYKQDFDSRRYYQQHDADYHEENMTN
CCCEEEEEECCCCCCCCEEEEEEECCCCCCCHHHCCCHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
ATVLLLLVFISGCGNDKYVKEIDEAVKIQNQKQEQLAKKGNGDRVDHFERKDANIYVYD
HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEE
KDKIIILAYKPLSNDDEVHYYAYDFSDKRVSYKQDFDSRRYYQQHDADYHEENMTN
CCCEEEEEECCCCCCCCEEEEEEECCCCCCCHHHCCCHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA