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The map label for this gene is scrA [H]

Identifier: 88196301

GI number: 88196301

Start: 2444928

End: 2446178

Strand: Reverse

Name: scrA [H]

Synonym: SAOUHSC_02661

Alternate gene names: 88196301

Gene position: 2446178-2444928 (Counterclockwise)

Preceding gene: 88196302

Following gene: 88196298

Centisome position: 86.7

GC content: 35.25

Gene sequence:

>1251_bases
TTGGGTCTGGTACAGGGGAATAAAGTATTTAGTGAACTGGAAAAATTAACTGGAAAAGAAGCATCAACCACTTCGGAAGT
CAAAGCACAATCTGCTAAAAATATGAATCCGTTACAGCGATTTGTAAAAATGCTTTCAGATATCTTTGTTCCGATTATAC
CAGCCATCGTTGCTGGTGGTTTATTAATGGGGTTAAATAACATTTTGACTGCGAAAGATTTATTCTTTTCAGGTAAATCA
TTGATAGATGTATATAGTCAATTTGCTGGATTAGCTGAAATGATAAATGTTTTTGCGAATGCACCATTTACATTATTACC
AATTTTAATTGGATTTAGTGCAGCAAAACGCTTTGGTGGCAATCCATTTTTAGGTGCTGCATTAGGTATGATACTAGTTC
ATCCATCGCTAATGAGCGCATACGATTTCCCAAAAGCAGTTGAAGCAGGTAAGGCTATTCCATATTGGGATGTTTTTGGT
TTGCATATTAATCAAGTAGGTTATCAAGGACAAGTGTTACCTATGCTTGTAGCAGCTTATATCTTAGCCTCAATTGAAAA
AGGGTTACGCAAAGTTATTCCAACGGTGTTAGATAATTTGTTAACACCATTGTTATCTATTTTTATAACAGCATTTCTAA
CATTTTCATTTGTAGGTCCAATCACTCGACAATTAGGTTACTGGTTATCAGATGGTTTAACATGGCTTTATGAATTTGGT
GGTGCAATTGGTGGATTAATATTCGGATTATTGTATGCTCCGATTGTTATTACAGGTATGCATCATAGCTTTATAGCTGT
AGAAACGACATTAATTGCAGATGCCACTAAAACGGGTGGATCATTTATATTCCCGATTGCGACAATGTCTAATGTTGCAC
AAGGTGGTGCAGCAATTGCAGCGTTCTTTATTATTAAACAAAATAAGAAGTTAAAAGGTGTGGCATCTGCCGCAGGTATT
TCAGCATTACTTGGTATTACAGAACCGGCTATGTTTGGTGTTAACTTAAAACTAAGATATCCATTTATTGGCGCTATCGT
TGGATCAGGTATTGGTTCAGCATATATTGCTTTCTTCAAGGTTAAAGCAATCGCATTAGGAACTGCTGGATTGCCAGGAT
TTATTTCAATCAATCCAGTACATGCAGGATGGTTACACTACTTTGTTGGTATGACAATATCATTCATCATTGCTATAACA
GTTACTTTAATTTTATCTAAAAGAAAAGCAAATAAAGAAGTTGTAGAATAA

Upstream 100 bases:

>100_bases
TTAGTTTTAAATGATGAAAGTTTAGTAAATGAGGAGGCGCTAAACAATATGGATGTAGTTAAAGGGACGTTTTCTACTGG
GGGACAATACCAAATTATTA

Downstream 100 bases:

>100_bases
AAAAAGAGGTATGACAGTAATCAAAGTATCAGTCATTGCAAATGCAATAGGATGAAACTTTAAGCTGTCATACCTTTTAA
TTTAGTTATAATTTCTGTTT

Product: PTS system sucrose-specific transporter subunit IIBC

Products: NA

Alternate protein names: EIIBC-Scr; EII-Scr; Sucrose-specific phosphotransferase enzyme IIB component; PTS system sucrose-specific EIIB component; Sucrose permease IIC component; PTS system sucrose-specific EIIC component [H]

Number of amino acids: Translated: 416; Mature: 415

Protein sequence:

>416_residues
MGLVQGNKVFSELEKLTGKEASTTSEVKAQSAKNMNPLQRFVKMLSDIFVPIIPAIVAGGLLMGLNNILTAKDLFFSGKS
LIDVYSQFAGLAEMINVFANAPFTLLPILIGFSAAKRFGGNPFLGAALGMILVHPSLMSAYDFPKAVEAGKAIPYWDVFG
LHINQVGYQGQVLPMLVAAYILASIEKGLRKVIPTVLDNLLTPLLSIFITAFLTFSFVGPITRQLGYWLSDGLTWLYEFG
GAIGGLIFGLLYAPIVITGMHHSFIAVETTLIADATKTGGSFIFPIATMSNVAQGGAAIAAFFIIKQNKKLKGVASAAGI
SALLGITEPAMFGVNLKLRYPFIGAIVGSGIGSAYIAFFKVKAIALGTAGLPGFISINPVHAGWLHYFVGMTISFIIAIT
VTLILSKRKANKEVVE

Sequences:

>Translated_416_residues
MGLVQGNKVFSELEKLTGKEASTTSEVKAQSAKNMNPLQRFVKMLSDIFVPIIPAIVAGGLLMGLNNILTAKDLFFSGKS
LIDVYSQFAGLAEMINVFANAPFTLLPILIGFSAAKRFGGNPFLGAALGMILVHPSLMSAYDFPKAVEAGKAIPYWDVFG
LHINQVGYQGQVLPMLVAAYILASIEKGLRKVIPTVLDNLLTPLLSIFITAFLTFSFVGPITRQLGYWLSDGLTWLYEFG
GAIGGLIFGLLYAPIVITGMHHSFIAVETTLIADATKTGGSFIFPIATMSNVAQGGAAIAAFFIIKQNKKLKGVASAAGI
SALLGITEPAMFGVNLKLRYPFIGAIVGSGIGSAYIAFFKVKAIALGTAGLPGFISINPVHAGWLHYFVGMTISFIIAIT
VTLILSKRKANKEVVE
>Mature_415_residues
GLVQGNKVFSELEKLTGKEASTTSEVKAQSAKNMNPLQRFVKMLSDIFVPIIPAIVAGGLLMGLNNILTAKDLFFSGKSL
IDVYSQFAGLAEMINVFANAPFTLLPILIGFSAAKRFGGNPFLGAALGMILVHPSLMSAYDFPKAVEAGKAIPYWDVFGL
HINQVGYQGQVLPMLVAAYILASIEKGLRKVIPTVLDNLLTPLLSIFITAFLTFSFVGPITRQLGYWLSDGLTWLYEFGG
AIGGLIFGLLYAPIVITGMHHSFIAVETTLIADATKTGGSFIFPIATMSNVAQGGAAIAAFFIIKQNKKLKGVASAAGIS
ALLGITEPAMFGVNLKLRYPFIGAIVGSGIGSAYIAFFKVKAIALGTAGLPGFISINPVHAGWLHYFVGMTISFIIAITV
TLILSKRKANKEVVE

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This

COG id: COG1263

COG function: function code G; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIC type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI2367362, Length=368, Percent_Identity=35.3260869565217, Blast_Score=221, Evalue=9e-59,
Organism=Escherichia coli, GI1790159, Length=395, Percent_Identity=28.8607594936709, Blast_Score=162, Evalue=5e-41,
Organism=Escherichia coli, GI1788769, Length=424, Percent_Identity=28.3018867924528, Blast_Score=125, Evalue=5e-30,
Organism=Escherichia coli, GI48994906, Length=365, Percent_Identity=28.2191780821918, Blast_Score=118, Evalue=6e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018113
- InterPro:   IPR001996
- InterPro:   IPR003352
- InterPro:   IPR013013
- InterPro:   IPR011535
- InterPro:   IPR010973 [H]

Pfam domain/function: PF00367 PTS_EIIB; PF02378 PTS_EIIC [H]

EC number: =2.7.1.69 [H]

Molecular weight: Translated: 44264; Mature: 44133

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: PS51103 PTS_EIIC_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHEECCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
GLVQGNKVFSELEKLTGKEASTTSEVKAQSAKNMNPLQRFVKMLSDIFVPIIPAIVAGG
CCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LLMGLNNILTAKDLFFSGKSLIDVYSQFAGLAEMINVFANAPFTLLPILIGFSAAKRFGG
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
NPFLGAALGMILVHPSLMSAYDFPKAVEAGKAIPYWDVFGLHINQVGYQGQVLPMLVAAY
CCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHH
ILASIEKGLRKVIPTVLDNLLTPLLSIFITAFLTFSFVGPITRQLGYWLSDGLTWLYEFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAIGGLIFGLLYAPIVITGMHHSFIAVETTLIADATKTGGSFIFPIATMSNVAQGGAAIA
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHCCHHHHH
AFFIIKQNKKLKGVASAAGISALLGITEPAMFGVNLKLRYPFIGAIVGSGIGSAYIAFFK
HHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHCCCEEEEECCHHHHHHHCCHHHHHHHHHH
VKAIALGTAGLPGFISINPVHAGWLHYFVGMTISFIIAITVTLILSKRKANKEVVE
HHHHHEECCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8232209 [H]