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The map label for this gene is ytnL [H]

Identifier: 88196247

GI number: 88196247

Start: 2393768

End: 2394889

Strand: Reverse

Name: ytnL [H]

Synonym: SAOUHSC_02605

Alternate gene names: 88196247

Gene position: 2394889-2393768 (Counterclockwise)

Preceding gene: 88196248

Following gene: 88196246

Centisome position: 84.88

GC content: 37.08

Gene sequence:

>1122_bases
ATGGGATTAAAAGATCAAGCTGTTACCTGGAGAAGGTATTTTCATCAATTTCCAGAACTATCCGATAAAGAATTTAAGAC
TACACAAAAAATTAAAGATATTTTAACAGAACATCATATTAGAATATTAGACTTACCACTTGCGACTGGGCTTGTTGCTG
AAGTGGGACAAGGTCTGAGTTGTATAGCTGTTCGGGCTGACATTGATGCTTTACCGATTCAAGAGCTTGTTGAACAGGAT
TTTAAATCTGAAAATGAAGGTGTTATGCATGCGTGTGGTCATGATATTCACATGGCTAGTATTTTGGCTACAGCTGTAAA
ATTAAAAGAAATTGAGGGCACTCTTACTGGGCGTGTTAAATTCATTTTTCAATCAGCAGAAGAACTAGGACATGGCGCTT
TTAAAATTATTGAAACACATGCATTAAAAGATGTACAAGCAGTATTGGGTTTTCATAATGACCCATCGCGTTCGGTAGGT
ACATTTGCAATCAAAACAGGGGCAATTACATCAGCAGTAGATCGTTTTGAGTTTCATATTAAAGGCGTGGGTGGTCATGC
TGCAAAGCCAGAACAATGCAACGATCCAGTTATTGTGTTGGCGCAATTGATTAATAGTATTCAATCCATAGTTAGTAGAA
ATCTATCTGCGTTTGATGAAGCGGTAGTAACAATTGGACAAATATCATGTGGTAATACTTGGAATGTCATTGCTGATCAT
GCGTATGTACAAGGCACAGTGCGTAGTTTTGATCCTGTGGTACGAAAGCTTGTAGAAACACGATTACAAGATATTGCGGA
CGGATTGGCTCAAGCATATAATATGAAAATTAATTTAAATTATACGCATTTACCTGGCGCTGTGATGAATGATGAGGCAT
TGACGCATAAAGCAATTGCAGTAGCCCAACATGTTGGATATAAGGTGGGAATGATGGAACAGCCGCTTACGATTGGAGAA
GATTTTTCAGGTTATAGTCAACATTTTCCAAGTGTATTTGCGTTAATTGGTTCTCATAGTGAATATGATTTACATCATCC
TCAATATAAACCGGATGAAAGGATTCTGGAAAAAGTACCTGAGTATTTTGTTGAATTTGTAAAGAGACTATTGCATGAAT
AA

Upstream 100 bases:

>100_bases
ATTAACAAGAGTACATTGTTGTGAAATCATCGTTTAATAGTCAAAGATGATCATCGTAGGGTAGACAACATATCATTGAC
TTAAGGAAGGGGAATGACCG

Downstream 100 bases:

>100_bases
TTCGAGCTTGTTTTTATAAAGAAGAAAGTAATTTTTAGTGTAATCATGATTAAGTTCCTAGGAAGATTGGGTAAATAATA
ACCATTAAGCGAATAAGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 372

Protein sequence:

>373_residues
MGLKDQAVTWRRYFHQFPELSDKEFKTTQKIKDILTEHHIRILDLPLATGLVAEVGQGLSCIAVRADIDALPIQELVEQD
FKSENEGVMHACGHDIHMASILATAVKLKEIEGTLTGRVKFIFQSAEELGHGAFKIIETHALKDVQAVLGFHNDPSRSVG
TFAIKTGAITSAVDRFEFHIKGVGGHAAKPEQCNDPVIVLAQLINSIQSIVSRNLSAFDEAVVTIGQISCGNTWNVIADH
AYVQGTVRSFDPVVRKLVETRLQDIADGLAQAYNMKINLNYTHLPGAVMNDEALTHKAIAVAQHVGYKVGMMEQPLTIGE
DFSGYSQHFPSVFALIGSHSEYDLHHPQYKPDERILEKVPEYFVEFVKRLLHE

Sequences:

>Translated_373_residues
MGLKDQAVTWRRYFHQFPELSDKEFKTTQKIKDILTEHHIRILDLPLATGLVAEVGQGLSCIAVRADIDALPIQELVEQD
FKSENEGVMHACGHDIHMASILATAVKLKEIEGTLTGRVKFIFQSAEELGHGAFKIIETHALKDVQAVLGFHNDPSRSVG
TFAIKTGAITSAVDRFEFHIKGVGGHAAKPEQCNDPVIVLAQLINSIQSIVSRNLSAFDEAVVTIGQISCGNTWNVIADH
AYVQGTVRSFDPVVRKLVETRLQDIADGLAQAYNMKINLNYTHLPGAVMNDEALTHKAIAVAQHVGYKVGMMEQPLTIGE
DFSGYSQHFPSVFALIGSHSEYDLHHPQYKPDERILEKVPEYFVEFVKRLLHE
>Mature_372_residues
GLKDQAVTWRRYFHQFPELSDKEFKTTQKIKDILTEHHIRILDLPLATGLVAEVGQGLSCIAVRADIDALPIQELVEQDF
KSENEGVMHACGHDIHMASILATAVKLKEIEGTLTGRVKFIFQSAEELGHGAFKIIETHALKDVQAVLGFHNDPSRSVGT
FAIKTGAITSAVDRFEFHIKGVGGHAAKPEQCNDPVIVLAQLINSIQSIVSRNLSAFDEAVVTIGQISCGNTWNVIADHA
YVQGTVRSFDPVVRKLVETRLQDIADGLAQAYNMKINLNYTHLPGAVMNDEALTHKAIAVAQHVGYKVGMMEQPLTIGED
FSGYSQHFPSVFALIGSHSEYDLHHPQYKPDERILEKVPEYFVEFVKRLLHE

Specific function: Required But Not Essential For Aminobenzoyl-Glutamate Utilization. May Participate In Hydrolysis Of Aminobenzoyl- Glutamate To Aminobenzoate, Either Alone Or In Combination With Abgb. [C]

COG id: COG1473

COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI87081880, Length=330, Percent_Identity=28.7878787878788, Blast_Score=84, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017439
- InterPro:   IPR010168
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: NA

Molecular weight: Translated: 41397; Mature: 41266

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLKDQAVTWRRYFHQFPELSDKEFKTTQKIKDILTEHHIRILDLPLATGLVAEVGQGLS
CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHCCCCE
CIAVRADIDALPIQELVEQDFKSENEGVMHACGHDIHMASILATAVKLKEIEGTLTGRVK
EEEEECCCCCCCHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
FIFQSAEELGHGAFKIIETHALKDVQAVLGFHNDPSRSVGTFAIKTGAITSAVDRFEFHI
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHEEEE
KGVGGHAAKPEQCNDPVIVLAQLINSIQSIVSRNLSAFDEAVVTIGQISCGNTWNVIADH
EECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCHHHCH
AYVQGTVRSFDPVVRKLVETRLQDIADGLAQAYNMKINLNYTHLPGAVMNDEALTHKAIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCCCHHHHHHHHH
VAQHVGYKVGMMEQPLTIGEDFSGYSQHFPSVFALIGSHSEYDLHHPQYKPDERILEKVP
HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
EYFVEFVKRLLHE
HHHHHHHHHHHCC
>Mature Secondary Structure 
GLKDQAVTWRRYFHQFPELSDKEFKTTQKIKDILTEHHIRILDLPLATGLVAEVGQGLS
CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHCCCCE
CIAVRADIDALPIQELVEQDFKSENEGVMHACGHDIHMASILATAVKLKEIEGTLTGRVK
EEEEECCCCCCCHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
FIFQSAEELGHGAFKIIETHALKDVQAVLGFHNDPSRSVGTFAIKTGAITSAVDRFEFHI
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHEEEE
KGVGGHAAKPEQCNDPVIVLAQLINSIQSIVSRNLSAFDEAVVTIGQISCGNTWNVIADH
EECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCHHHCH
AYVQGTVRSFDPVVRKLVETRLQDIADGLAQAYNMKINLNYTHLPGAVMNDEALTHKAIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCCCHHHHHHHHH
VAQHVGYKVGMMEQPLTIGEDFSGYSQHFPSVFALIGSHSEYDLHHPQYKPDERILEKVP
HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
EYFVEFVKRLLHE
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]