Click here to switch to the map view.

The map label for this gene is 88196217

Identifier: 88196217

GI number: 88196217

Start: 2363234

End: 2364634

Strand: Reverse

Name: 88196217

Synonym: SAOUHSC_02573

Alternate gene names: NA

Gene position: 2364634-2363234 (Counterclockwise)

Preceding gene: 88196218

Following gene: 88196216

Centisome position: 83.81

GC content: 35.05

Gene sequence:

>1401_bases
ATGATGAAAAGAAAACCCACCTTTTTAGAATCAATTTCGACAATGATTGTAATGGTTATTGTTGTTGTAACAGGCTTTGT
GTTTTTTGATATTCCAATTCAAGTATTATTAATTATTGCCTCAGCATATGCCACATGGATTGCAAAACGTGTAGGCTTAA
CATGGCAAGATTTAGAAAAAGGCATTGCAGAACGTTTAAATACTGCAATGCCTGCAATTTTAATTATACTAGCGGTAGGA
ATTATAGTAGGCAGTTGGATGTTTTCTGGCACAGTGCCAGCCTTGATTTATTATGGCTTAGATTTATTGAATCCAAGCTA
TTTTTTAATATCAGCCTTTTTTATAAGTGCTGTTACATCTGTAGCAACTGGTACAGCATGGGGCTCTGCATCAACTGCAG
GGATTGCACTTATTTCTATTGGTAATCAATTGGGGATTCCTCCAGGGATGGCAGCGGGTGCTATTATAGCAGGGGCTGTG
TTTGGCGATAAAATGTCACCATTATCAGATACAACTAATTTAGCGGCGCTTGTTACTAAAGTTAATATATTTAAACATAT
ACATTCGATGATGTGGACGACGATACCTGCATCAATCATAGGTTTATTAGTATGGTTTATTGCTGGATTTCAATTTAAAG
GGCATTCAAATGATAAACAGATTCAAACTTTGTTATCAGAGCTTGCACAGATTTATCAAATTAACATATGGGTCTGGGTT
CCCTTAATTGTGATCATTGTTTGTTTGCTATTTAAAATGGCTACAGTGCCAGCTATGCTAATATCAAGCTTTTCTGCCAT
TATAGTGGGGACTTTTAATCATCATTTCAAAATGACAGATGGTTTCAAAGCAACATTTAGTGGTTTTAACGAATCAATGA
TACATCAGTCTCATATTTCATCCAGTGTGAAAAGCTTGTTAGAACAGGGTGGTATGATGAGTATGACCCAAATATTAGTA
ACGATATTTTGCGGATATGCATTTGCAGGTATTGTAGAAAAAGCAGGATGTTTAGAAGTCTTATTAACTACTATTTCTAA
AGGCATCCATTCTGTAGGAAGTTTAATATGTATTACTGTTATTTGTTGTATTGCGCTTGTATTCGCTGCAGGTGTTGCTT
CGATTGTAATTATTATGGTCGGTGTGTTAATGAAAGATTTGTTCGAAAAATACCAAGTCTCTCGTTCCGTTTTATCAAGA
ACACTTGAAGACTCAAGTACGATGGTCTTACCTTTAATACCATGGGGAACATCAGGTATTTACTATACGAATCAACTTCA
TGTCTCTGTTGAAGAATTTTTCATATGGACAGTACCATGTTATTTATGCGCAATTATAGCAATTATCTATGGTTTTACAG
GGATAGGTATTAAAAAGTCATCGAATTCACGTTTAACTTAA

Upstream 100 bases:

>100_bases
AAATAAATGATGGCTTGAAGATAGAAAAGGATATAGCATTATGCAAAAGCAATAAATTGAAGAAAAGAGGTTTCTCATCA
ATAAGCGAAGGGGACGATAG

Downstream 100 bases:

>100_bases
TGTGAGCGTGGAATATATATAATATGTTGAAACACTTTAATCATTTATAATTGTAGCGGTTATAATTTGAAAAGGTTTTA
ACTTAGAATAAATATCCTCT

Product: Na+/H+ antiporter NhaC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 466; Mature: 466

Protein sequence:

>466_residues
MMKRKPTFLESISTMIVMVIVVVTGFVFFDIPIQVLLIIASAYATWIAKRVGLTWQDLEKGIAERLNTAMPAILIILAVG
IIVGSWMFSGTVPALIYYGLDLLNPSYFLISAFFISAVTSVATGTAWGSASTAGIALISIGNQLGIPPGMAAGAIIAGAV
FGDKMSPLSDTTNLAALVTKVNIFKHIHSMMWTTIPASIIGLLVWFIAGFQFKGHSNDKQIQTLLSELAQIYQINIWVWV
PLIVIIVCLLFKMATVPAMLISSFSAIIVGTFNHHFKMTDGFKATFSGFNESMIHQSHISSSVKSLLEQGGMMSMTQILV
TIFCGYAFAGIVEKAGCLEVLLTTISKGIHSVGSLICITVICCIALVFAAGVASIVIIMVGVLMKDLFEKYQVSRSVLSR
TLEDSSTMVLPLIPWGTSGIYYTNQLHVSVEEFFIWTVPCYLCAIIAIIYGFTGIGIKKSSNSRLT

Sequences:

>Translated_466_residues
MMKRKPTFLESISTMIVMVIVVVTGFVFFDIPIQVLLIIASAYATWIAKRVGLTWQDLEKGIAERLNTAMPAILIILAVG
IIVGSWMFSGTVPALIYYGLDLLNPSYFLISAFFISAVTSVATGTAWGSASTAGIALISIGNQLGIPPGMAAGAIIAGAV
FGDKMSPLSDTTNLAALVTKVNIFKHIHSMMWTTIPASIIGLLVWFIAGFQFKGHSNDKQIQTLLSELAQIYQINIWVWV
PLIVIIVCLLFKMATVPAMLISSFSAIIVGTFNHHFKMTDGFKATFSGFNESMIHQSHISSSVKSLLEQGGMMSMTQILV
TIFCGYAFAGIVEKAGCLEVLLTTISKGIHSVGSLICITVICCIALVFAAGVASIVIIMVGVLMKDLFEKYQVSRSVLSR
TLEDSSTMVLPLIPWGTSGIYYTNQLHVSVEEFFIWTVPCYLCAIIAIIYGFTGIGIKKSSNSRLT
>Mature_466_residues
MMKRKPTFLESISTMIVMVIVVVTGFVFFDIPIQVLLIIASAYATWIAKRVGLTWQDLEKGIAERLNTAMPAILIILAVG
IIVGSWMFSGTVPALIYYGLDLLNPSYFLISAFFISAVTSVATGTAWGSASTAGIALISIGNQLGIPPGMAAGAIIAGAV
FGDKMSPLSDTTNLAALVTKVNIFKHIHSMMWTTIPASIIGLLVWFIAGFQFKGHSNDKQIQTLLSELAQIYQINIWVWV
PLIVIIVCLLFKMATVPAMLISSFSAIIVGTFNHHFKMTDGFKATFSGFNESMIHQSHISSSVKSLLEQGGMMSMTQILV
TIFCGYAFAGIVEKAGCLEVLLTTISKGIHSVGSLICITVICCIALVFAAGVASIVIIMVGVLMKDLFEKYQVSRSVLSR
TLEDSSTMVLPLIPWGTSGIYYTNQLHVSVEEFFIWTVPCYLCAIIAIIYGFTGIGIKKSSNSRLT

Specific function: Unknown

COG id: COG1757

COG function: function code C; Na+/H+ antiporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nhaC Na(+)/H(+) antiporter family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004770
- InterPro:   IPR018461 [H]

Pfam domain/function: PF03553 Na_H_antiporter [H]

EC number: NA

Molecular weight: Translated: 50438; Mature: 50438

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKRKPTFLESISTMIVMVIVVVTGFVFFDIPIQVLLIIASAYATWIAKRVGLTWQDLEK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
GIAERLNTAMPAILIILAVGIIVGSWMFSGTVPALIYYGLDLLNPSYFLISAFFISAVTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
VATGTAWGSASTAGIALISIGNQLGIPPGMAAGAIIAGAVFGDKMSPLSDTTNLAALVTK
HHCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
VNIFKHIHSMMWTTIPASIIGLLVWFIAGFQFKGHSNDKQIQTLLSELAQIYQINIWVWV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
PLIVIIVCLLFKMATVPAMLISSFSAIIVGTFNHHFKMTDGFKATFSGFNESMIHQSHIS
HHHHHHHHHHHHHHHHHHHHHHCHHHHEEECCCCCEEECCCCHHHHCCCCHHHHHHHHHH
SSVKSLLEQGGMMSMTQILVTIFCGYAFAGIVEKAGCLEVLLTTISKGIHSVGSLICITV
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ICCIALVFAAGVASIVIIMVGVLMKDLFEKYQVSRSVLSRTLEDSSTMVLPLIPWGTSGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCE
YYTNQLHVSVEEFFIWTVPCYLCAIIAIIYGFTGIGIKKSSNSRLT
EEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCC
>Mature Secondary Structure
MMKRKPTFLESISTMIVMVIVVVTGFVFFDIPIQVLLIIASAYATWIAKRVGLTWQDLEK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
GIAERLNTAMPAILIILAVGIIVGSWMFSGTVPALIYYGLDLLNPSYFLISAFFISAVTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
VATGTAWGSASTAGIALISIGNQLGIPPGMAAGAIIAGAVFGDKMSPLSDTTNLAALVTK
HHCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
VNIFKHIHSMMWTTIPASIIGLLVWFIAGFQFKGHSNDKQIQTLLSELAQIYQINIWVWV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
PLIVIIVCLLFKMATVPAMLISSFSAIIVGTFNHHFKMTDGFKATFSGFNESMIHQSHIS
HHHHHHHHHHHHHHHHHHHHHHCHHHHEEECCCCCEEECCCCHHHHCCCCHHHHHHHHHH
SSVKSLLEQGGMMSMTQILVTIFCGYAFAGIVEKAGCLEVLLTTISKGIHSVGSLICITV
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ICCIALVFAAGVASIVIIMVGVLMKDLFEKYQVSRSVLSRTLEDSSTMVLPLIPWGTSGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCE
YYTNQLHVSVEEFFIWTVPCYLCAIIAIIYGFTGIGIKKSSNSRLT
EEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]