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The map label for this gene is ydbM [H]

Identifier: 88196200

GI number: 88196200

Start: 2349715

End: 2349891

Strand: Reverse

Name: ydbM [H]

Synonym: SAOUHSC_02555

Alternate gene names: 88196200

Gene position: 2349891-2349715 (Counterclockwise)

Preceding gene: 88196201

Following gene: 88196199

Centisome position: 83.29

GC content: 36.16

Gene sequence:

>177_bases
ATGAATCAAGGGCTTGAAGTGATTGATTTAGCGATGAGAATAGTTGGTGCTAAAAGCTTAGAAATGAATCGACCATTACA
ACGTTACTATCGTGACATGCGTGCAGGATTACACAATCCACCTATGGAAGATGCAGCATATACAAATATTGCTAAGAGTA
TTACAGATACATTTTAA

Upstream 100 bases:

>100_bases
CTGAGTACAATATTTTATGTGAGTACACGCAAAAGGGTATCAACAATATAAAGATGACAGTCAGATAAGAAATCCCACAA
GTGCGAGTAAAGTGATGGTA

Downstream 100 bases:

>100_bases
ATTTTAAAAGGTAAATCGATCGTTGATTGGCATAAAGAGATGAAATTTGACGTTCGGATTTACCCTTTTTTTGTGGGGAT
TTATAGGGATGTTAAGATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 58; Mature: 58

Protein sequence:

>58_residues
MNQGLEVIDLAMRIVGAKSLEMNRPLQRYYRDMRAGLHNPPMEDAAYTNIAKSITDTF

Sequences:

>Translated_58_residues
MNQGLEVIDLAMRIVGAKSLEMNRPLQRYYRDMRAGLHNPPMEDAAYTNIAKSITDTF
>Mature_58_residues
MNQGLEVIDLAMRIVGAKSLEMNRPLQRYYRDMRAGLHNPPMEDAAYTNIAKSITDTF

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013107
- InterPro:   IPR006092
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF08028 Acyl-CoA_dh_2; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 6629; Mature: 6629

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.6 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
8.6 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQGLEVIDLAMRIVGAKSLEMNRPLQRYYRDMRAGLHNPPMEDAAYTNIAKSITDTF
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNQGLEVIDLAMRIVGAKSLEMNRPLQRYYRDMRAGLHNPPMEDAAYTNIAKSITDTF
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]