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The map label for this gene is 88196170

Identifier: 88196170

GI number: 88196170

Start: 2325196

End: 2326086

Strand: Reverse

Name: 88196170

Synonym: SAOUHSC_02522

Alternate gene names: NA

Gene position: 2326086-2325196 (Counterclockwise)

Preceding gene: 88196173

Following gene: 88196169

Centisome position: 82.45

GC content: 32.32

Gene sequence:

>891_bases
ATGATTATTTTATTAATTGCGCTTGGTTACTTTTTGAAGCGCATTAATTTTATAAAAGCAACAGATAGTCAAGTCATTGC
TACATTAGTTCTTAATGTCACACTCCCATCTTTAGTTATTGTGAATTTAAACAGTGCAGAATTAAAATTGTCATTCTCCA
TTTTACCAATTTTAATGATTATATATGGTATTGTGGCGAAAATGATTGCTGTCTGGTTTTTTAGAAAATATGATAATCAC
ATGCGTGGATCAGTAGGTATGATGACTGGTGCTATGAATATTGGATTGTTTGCATATCCACTAATTGAAGTGATATGGCC
TAAAACGGGACTTATTTATTTTGTTATGGCTGATATAGGTGGTGCCTTTGTGATGTTTGGAATTACTTACTTTGTAGGTA
GCTACTTTAGTGAAGGTAGTGATCAATTCGATTTTAAATATTTAGGTAAGAAATTATTACAATCAGTGCCACTCGTTACA
TACATTGTAATGTTTATATTGAATATAAGTCACATCCATTTACCACATGTGGCAATCGATTTCTTTAGCATACTTTCCCA
TGCAAATATGCCGTTATCAATGATTTTGCTAGGTGTCATGTTGAATTTTACTCTGGAAAGAAAGTATATACCTGCTACTA
TTAAATATTTATGTTTGCATTATGGATTAGCATTAGTTGCGGGATTGTTAGTATATGTGTTGTTACCAGTATCAGATGAT
ATGATTAAGACGACATTGTTGGTCACTTGGATGTTCCCGGTAGGTGTTGCAATTATTTCTTATGGTATTCAGTTTAAATA
TCGAACACTGCCATTTATAGGTATGACGACCAATTTGACAATCATTATTAGTATCATTATTTTGTACGTGTATCAGGCAG
TGTTTGTCTAG

Upstream 100 bases:

>100_bases
GCATGAAACAGTAGACTTCTAAAATATCTGTGGAGTATGTTAAAGTTATAAATTATGAAGATTATTGAAAGAAGGGATAA
CAGTGACAGAACAATTTACT

Downstream 100 bases:

>100_bases
TTTACACATTTGAAAATAAAATCCATTTTAGTATTCGTAGAAAATGAGAGCCCCCTTTACCACAATATGTAAATGTATAT
TGTGAAAAGGGGGCTTTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: Permease; Transporter Protein; Efflux Carrier; LOW QUALITY PROTEIN Auxin Efflux Carrier; Auxin Efflux Carrier Family Protein; Transporter Auxin Efflux Carrier Family; Auxin Efflux Carrier Family Transporter; Malonate Efflux Carrier

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MIILLIALGYFLKRINFIKATDSQVIATLVLNVTLPSLVIVNLNSAELKLSFSILPILMIIYGIVAKMIAVWFFRKYDNH
MRGSVGMMTGAMNIGLFAYPLIEVIWPKTGLIYFVMADIGGAFVMFGITYFVGSYFSEGSDQFDFKYLGKKLLQSVPLVT
YIVMFILNISHIHLPHVAIDFFSILSHANMPLSMILLGVMLNFTLERKYIPATIKYLCLHYGLALVAGLLVYVLLPVSDD
MIKTTLLVTWMFPVGVAIISYGIQFKYRTLPFIGMTTNLTIIISIIILYVYQAVFV

Sequences:

>Translated_296_residues
MIILLIALGYFLKRINFIKATDSQVIATLVLNVTLPSLVIVNLNSAELKLSFSILPILMIIYGIVAKMIAVWFFRKYDNH
MRGSVGMMTGAMNIGLFAYPLIEVIWPKTGLIYFVMADIGGAFVMFGITYFVGSYFSEGSDQFDFKYLGKKLLQSVPLVT
YIVMFILNISHIHLPHVAIDFFSILSHANMPLSMILLGVMLNFTLERKYIPATIKYLCLHYGLALVAGLLVYVLLPVSDD
MIKTTLLVTWMFPVGVAIISYGIQFKYRTLPFIGMTTNLTIIISIIILYVYQAVFV
>Mature_296_residues
MIILLIALGYFLKRINFIKATDSQVIATLVLNVTLPSLVIVNLNSAELKLSFSILPILMIIYGIVAKMIAVWFFRKYDNH
MRGSVGMMTGAMNIGLFAYPLIEVIWPKTGLIYFVMADIGGAFVMFGITYFVGSYFSEGSDQFDFKYLGKKLLQSVPLVT
YIVMFILNISHIHLPHVAIDFFSILSHANMPLSMILLGVMLNFTLERKYIPATIKYLCLHYGLALVAGLLVYVLLPVSDD
MIKTTLLVTWMFPVGVAIISYGIQFKYRTLPFIGMTTNLTIIISIIILYVYQAVFV

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33321; Mature: 33321

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIILLIALGYFLKRINFIKATDSQVIATLVLNVTLPSLVIVNLNSAELKLSFSILPILMI
CEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCEEEEEECCCHHEEEHHHHHHHHHH
IYGIVAKMIAVWFFRKYDNHMRGSVGMMTGAMNIGLFAYPLIEVIWPKTGLIYFVMADIG
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHC
GAFVMFGITYFVGSYFSEGSDQFDFKYLGKKLLQSVPLVTYIVMFILNISHIHLPHVAID
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHH
FFSILSHANMPLSMILLGVMLNFTLERKYIPATIKYLCLHYGLALVAGLLVYVLLPVSDD
HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
MIKTTLLVTWMFPVGVAIISYGIQFKYRTLPFIGMTTNLTIIISIIILYVYQAVFV
HHHHHHHHHHHHHHHHHHHHHCCEEEEEECCEEECHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIILLIALGYFLKRINFIKATDSQVIATLVLNVTLPSLVIVNLNSAELKLSFSILPILMI
CEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCEEEEEECCCHHEEEHHHHHHHHHH
IYGIVAKMIAVWFFRKYDNHMRGSVGMMTGAMNIGLFAYPLIEVIWPKTGLIYFVMADIG
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHC
GAFVMFGITYFVGSYFSEGSDQFDFKYLGKKLLQSVPLVTYIVMFILNISHIHLPHVAID
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHH
FFSILSHANMPLSMILLGVMLNFTLERKYIPATIKYLCLHYGLALVAGLLVYVLLPVSDD
HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
MIKTTLLVTWMFPVGVAIISYGIQFKYRTLPFIGMTTNLTIIISIIILYVYQAVFV
HHHHHHHHHHHHHHHHHHHHHCCEEEEEECCEEECHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA