Click here to switch to the map view.

The map label for this gene is pinE [C]

Identifier: 88196055

GI number: 88196055

Start: 2212638

End: 2212841

Strand: Reverse

Name: pinE [C]

Synonym: SAOUHSC_02392

Alternate gene names: 88196055

Gene position: 2212841-2212638 (Counterclockwise)

Preceding gene: 88196056

Following gene: 88196054

Centisome position: 78.43

GC content: 33.82

Gene sequence:

>204_bases
ATGATCGTGTATCAACGAAAGATTAATATCGATACACTTAAAGAATTTGGGTGTGGGTGTGTATATAGTGAAAGAATAAG
TGGTGTCAAACGTACAGAGCTTGTTAAGTGTTTAGATTATTTACGAGAGAGCGACACATTAGTTGTCTATCAACTTGATC
GGTTAGGTAGAACGACAAAACTATTAATTGAATTATCACAATGA

Upstream 100 bases:

>100_bases
GATATATTAATACAAAATCAAAAATACGGCAATGAGTTTTGAGTCATAACTAAATATAATATGTTGAAGAGAGGTTTTAT
TTAAATGGCTAAAATTGGTT

Downstream 100 bases:

>100_bases
TTCGATGATAACGGAATTGACTTACAAATTAGTAACATGAACATTTCAACGAAAGACACAATGGGCAAAATGTTTTTTAC
GATGATGAGTGCATTTTTCA

Product: truncated resolvase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 67; Mature: 67

Protein sequence:

>67_residues
MIVYQRKINIDTLKEFGCGCVYSERISGVKRTELVKCLDYLRESDTLVVYQLDRLGRTTKLLIELSQ

Sequences:

>Translated_67_residues
MIVYQRKINIDTLKEFGCGCVYSERISGVKRTELVKCLDYLRESDTLVVYQLDRLGRTTKLLIELSQ
>Mature_67_residues
MIVYQRKINIDTLKEFGCGCVYSERISGVKRTELVKCLDYLRESDTLVVYQLDRLGRTTKLLIELSQ

Specific function: This Protein Catalyzes The Inversion Of An 1800-Bp E.Coli DNA Fragment, The P Region, Which Can Exist In Either Orientation. The Function Of The Inversion Is Not Yet Clear. [C]

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7815; Mature: 7815

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVYQRKINIDTLKEFGCGCVYSERISGVKRTELVKCLDYLRESDTLVVYQLDRLGRTTK
CEEEECCCCHHHHHHCCCCCEEHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCEE
LLIELSQ
EEEEECC
>Mature Secondary Structure
MIVYQRKINIDTLKEFGCGCVYSERISGVKRTELVKCLDYLRESDTLVVYQLDRLGRTTK
CEEEECCCCHHHHHHCCCCCEEHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCEE
LLIELSQ
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA