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The map label for this gene is ydiB [H]

Identifier: 88195950

GI number: 88195950

Start: 2110834

End: 2111268

Strand: Reverse

Name: ydiB [H]

Synonym: SAOUHSC_02280

Alternate gene names: 88195950

Gene position: 2111268-2110834 (Counterclockwise)

Preceding gene: 88195960

Following gene: 88195949

Centisome position: 74.83

GC content: 31.72

Gene sequence:

>435_bases
ATGAATCAATTTGCTATATTTTTAGTTGAGCAATTGAAAAGTGGTGATTTGATTTTACTTAACGGAGATTTAGGAGCAGG
TAAAACAACGTTAACGCAATTTATAGGAAAAGCTCTTGGTGTAAGACGTACGATTAATTCCCCGACATTTAACATCATTA
AATCATATAGGGGTAAAAATTTAAAATTGCATCATATGGATTGTTATCGCTTAGAAGATTCTGATGAAGATTTAGGATTT
GATGAATTTTTCGAAGATCAGGCAATTACTGTTATTGAATGGAGTCAATTTATAAAAGATTTACTTCCAGCGACGCATTT
ATCTATTAACATTTCAACAATATCTGAAAATACAAGACAAATTGAGTTGTTCGCGCAAGGAGAACATTATGAACAAATTA
AGGAGGCAATTATCCATGAATTCGCTGCTCATTGA

Upstream 100 bases:

>100_bases
TATAAAGTTAGATACGATTGAACAATGGATAATCATTTTTATGAATGAAAAGCATAATATAGGAGAATCAACATTGATAA
AGATAAATAATTTAGATGAA

Downstream 100 bases:

>100_bases
TACATCGAATCAACCATTATCAGTAGCATTGATGCAAAACGATGAAGTTTTAGCTGAAATAACTACGGATTCTAAACAAA
ATCATTCAGTGCAATTAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MNQFAIFLVEQLKSGDLILLNGDLGAGKTTLTQFIGKALGVRRTINSPTFNIIKSYRGKNLKLHHMDCYRLEDSDEDLGF
DEFFEDQAITVIEWSQFIKDLLPATHLSINISTISENTRQIELFAQGEHYEQIKEAIIHEFAAH

Sequences:

>Translated_144_residues
MNQFAIFLVEQLKSGDLILLNGDLGAGKTTLTQFIGKALGVRRTINSPTFNIIKSYRGKNLKLHHMDCYRLEDSDEDLGF
DEFFEDQAITVIEWSQFIKDLLPATHLSINISTISENTRQIELFAQGEHYEQIKEAIIHEFAAH
>Mature_144_residues
MNQFAIFLVEQLKSGDLILLNGDLGAGKTTLTQFIGKALGVRRTINSPTFNIIKSYRGKNLKLHHMDCYRLEDSDEDLGF
DEFFEDQAITVIEWSQFIKDLLPATHLSINISTISENTRQIELFAQGEHYEQIKEAIIHEFAAH

Specific function: Displays ATPase activity, which is modulated by the oligomeric status of the protein. The physiological partner is unknown [H]

COG id: COG0802

COG function: function code R; Predicted ATPase or kinase

Gene ontology:

Cell location: Cytoplasm. Note=Localized predominantly at the cell poles and at the periphery of the bacterium [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0079 family [H]

Homologues:

Organism=Escherichia coli, GI1790610, Length=97, Percent_Identity=39.1752577319588, Blast_Score=77, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003442 [H]

Pfam domain/function: PF02367 UPF0079 [H]

EC number: NA

Molecular weight: Translated: 16442; Mature: 16442

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQFAIFLVEQLKSGDLILLNGDLGAGKTTLTQFIGKALGVRRTINSPTFNIIKSYRGKN
CCCHHEEEEHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC
LKLHHMDCYRLEDSDEDLGFDEFFEDQAITVIEWSQFIKDLLPATHLSINISTISENTRQ
EEEECCEEEEECCCCCCCCHHHHHCCCCEEEEHHHHHHHHHCCHHEEEEEEEEECCCCEE
IELFAQGEHYEQIKEAIIHEFAAH
EEEEECCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNQFAIFLVEQLKSGDLILLNGDLGAGKTTLTQFIGKALGVRRTINSPTFNIIKSYRGKN
CCCHHEEEEHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC
LKLHHMDCYRLEDSDEDLGFDEFFEDQAITVIEWSQFIKDLLPATHLSINISTISENTRQ
EEEECCEEEEECCCCCCCCHHHHHCCCCEEEEHHHHHHHHHCCHHEEEEEEEEECCCCEE
IELFAQGEHYEQIKEAIIHEFAAH
EEEEECCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]