Click here to switch to the map view.

The map label for this gene is 88195865

Identifier: 88195865

GI number: 88195865

Start: 2051468

End: 2051800

Strand: Reverse

Name: 88195865

Synonym: SAOUHSC_02189

Alternate gene names: NA

Gene position: 2051800-2051468 (Counterclockwise)

Preceding gene: 88195866

Following gene: 88195864

Centisome position: 72.72

GC content: 33.63

Gene sequence:

>333_bases
ATGCAATTAACAGCTGAGGAACTTAAGTTATTAAAAAAGCATTGCAAAATAGATCACAATTCAGAGGACGACTTATTAGA
AATATATTACTCTTGGGCATTCCGTGAAATAGCTAGCGCTGTTACGGATAAACCAAGTAAATATATTGATTGGTTTAAAA
GTCATCCTCTATTTGCTCGTGCTATATACCCTTTAGCAAGTTACTATTTTGAAAACCGTATTGCTTATTTGGATAGGGAT
TTATCGCTTGCGCCACATATGGTTTTAAGTACGGTGCATAAATTGAGAGGTTCATTTGAGCAATTTTTGGAGAGTGAAAA
TGATGAAATTTAA

Upstream 100 bases:

>100_bases
AACGTGTTGAAATGACAGTAAAACGTGCTGAATATGTTAACAAAAAGCTGAAAGAGCATGGAGTAATACTTGAAAGAGTA
AAAGAAGAATAGGTGATTGA

Downstream 100 bases:

>100_bases
TTCCAATAAATTAAATGAACGTATAGATTTTTGTGAAGATGTAAGCGAGAGAGTGAACGGAAATCCGATGAAACCGAAGA
CGAAAATATTATACTCTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MQLTAEELKLLKKHCKIDHNSEDDLLEIYYSWAFREIASAVTDKPSKYIDWFKSHPLFARAIYPLASYYFENRIAYLDRD
LSLAPHMVLSTVHKLRGSFEQFLESENDEI

Sequences:

>Translated_110_residues
MQLTAEELKLLKKHCKIDHNSEDDLLEIYYSWAFREIASAVTDKPSKYIDWFKSHPLFARAIYPLASYYFENRIAYLDRD
LSLAPHMVLSTVHKLRGSFEQFLESENDEI
>Mature_110_residues
MQLTAEELKLLKKHCKIDHNSEDDLLEIYYSWAFREIASAVTDKPSKYIDWFKSHPLFARAIYPLASYYFENRIAYLDRD
LSLAPHMVLSTVHKLRGSFEQFLESENDEI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13017; Mature: 13017

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLTAEELKLLKKHCKIDHNSEDDLLEIYYSWAFREIASAVTDKPSKYIDWFKSHPLFAR
CCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHH
AIYPLASYYFENRIAYLDRDLSLAPHMVLSTVHKLRGSFEQFLESENDEI
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MQLTAEELKLLKKHCKIDHNSEDDLLEIYYSWAFREIASAVTDKPSKYIDWFKSHPLFAR
CCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHH
AIYPLASYYFENRIAYLDRDLSLAPHMVLSTVHKLRGSFEQFLESENDEI
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA