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The map label for this gene is 88195670

Identifier: 88195670

GI number: 88195670

Start: 1883880

End: 1884344

Strand: Reverse

Name: 88195670

Synonym: SAOUHSC_01979

Alternate gene names: NA

Gene position: 1884344-1883880 (Counterclockwise)

Preceding gene: 88195671

Following gene: 88195669

Centisome position: 66.79

GC content: 31.61

Gene sequence:

>465_bases
ATGGATAGACAGAGTTTTACAGATTTAATTCAAACAAAATTTAAAATGGTTCGTATAGAGGCTGGTTATACGCAAGATAC
TATGGCGCAAACAATTGGACTTTCTAAAAAGACTTTAGTACAAATCGAAAAAGAGAGAGTATTACCAAACTGGACAACTT
GTATTTCAATTTGTGCATTATTCAGAGACTCTGAAGTATTAAACAGTACATTTGGCTGTGATCCATTAGAAATCGTTCAA
ACAATTTCAAGAAATCATTGTGCATATCCAAACCATGCACCAACAAGTGATATTTATTGGAATAACATTGAGACTCGTAA
TGGGTACATTTTACAAAGTAACAAAGTAAGCAATATTTATCGTGTATTAAATCCAGATAACCAACCAATTTTCGGTACTT
CTAAAATGAGAGAAGCTGAAACATACTTTAACAGAAATGCTAAAGAAGAATTAGTACATATCTAG

Upstream 100 bases:

>100_bases
TAAAAATATATTAAGATGTAATCTGTGTTTCAAGAAATGTGTATTATTGCAATTTCTTGTGTCCGGATAAAATTCCCCAA
ACAGAAAGGTAGATAACAGA

Downstream 100 bases:

>100_bases
GCCTATATACTTTTAATAAATAATAAAAGCGATGTAACACACCTGTTTCGAGAGGTGAGGCATCGCTTTTTGTATGTAAA
CTAATAATAAATTGAGCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator XRE Family; Transcriptional Regulator; HTH Domain Protein; Helix-Turn-Helix Domain Protein

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MDRQSFTDLIQTKFKMVRIEAGYTQDTMAQTIGLSKKTLVQIEKERVLPNWTTCISICALFRDSEVLNSTFGCDPLEIVQ
TISRNHCAYPNHAPTSDIYWNNIETRNGYILQSNKVSNIYRVLNPDNQPIFGTSKMREAETYFNRNAKEELVHI

Sequences:

>Translated_154_residues
MDRQSFTDLIQTKFKMVRIEAGYTQDTMAQTIGLSKKTLVQIEKERVLPNWTTCISICALFRDSEVLNSTFGCDPLEIVQ
TISRNHCAYPNHAPTSDIYWNNIETRNGYILQSNKVSNIYRVLNPDNQPIFGTSKMREAETYFNRNAKEELVHI
>Mature_154_residues
MDRQSFTDLIQTKFKMVRIEAGYTQDTMAQTIGLSKKTLVQIEKERVLPNWTTCISICALFRDSEVLNSTFGCDPLEIVQ
TISRNHCAYPNHAPTSDIYWNNIETRNGYILQSNKVSNIYRVLNPDNQPIFGTSKMREAETYFNRNAKEELVHI

Specific function: Unknown

COG id: COG1476

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17798; Mature: 17798

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRQSFTDLIQTKFKMVRIEAGYTQDTMAQTIGLSKKTLVQIEKERVLPNWTTCISICAL
CCHHHHHHHHHHHHHHEEEECCCCHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHH
FRDSEVLNSTFGCDPLEIVQTISRNHCAYPNHAPTSDIYWNNIETRNGYILQSNKVSNIY
HHCHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCEECCCCEEEECCCHHHHH
RVLNPDNQPIFGTSKMREAETYFNRNAKEELVHI
HHCCCCCCCEECCHHHHHHHHHHCCCCHHHHCCC
>Mature Secondary Structure
MDRQSFTDLIQTKFKMVRIEAGYTQDTMAQTIGLSKKTLVQIEKERVLPNWTTCISICAL
CCHHHHHHHHHHHHHHEEEECCCCHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHH
FRDSEVLNSTFGCDPLEIVQTISRNHCAYPNHAPTSDIYWNNIETRNGYILQSNKVSNIY
HHCHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCEECCCCEEEECCCHHHHH
RVLNPDNQPIFGTSKMREAETYFNRNAKEELVHI
HHCCCCCCCEECCHHHHHHHHHHCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA