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The map label for this gene is ysxB [H]

Identifier: 88195457

GI number: 88195457

Start: 1658867

End: 1659187

Strand: Reverse

Name: ysxB [H]

Synonym: SAOUHSC_01756

Alternate gene names: 88195457

Gene position: 1659187-1658867 (Counterclockwise)

Preceding gene: 88195458

Following gene: 88195456

Centisome position: 58.81

GC content: 34.27

Gene sequence:

>321_bases
ATGATTACTGTTGATATTACAGTTAATGATGAAGGCAAAGTAACAGACGTTATTATGGATGGCCATGCTGACCATGGTGA
ATATGGTCATGATATCGTTTGTGCTGGAGCTTCAGCTGTATTGTTTGGTAGTGTTAATGCGATTATAGGATTGACATCTG
AGAGACCAGATATCAATTATGACGACAATGGTGGTCATTTTCATATAAGAAGCGTTGATACAAACAACGATGAAGCGCAA
CTAATTCTTCAAACAATGCTTGTGTCTTTACAAACTATTGAAGAAGAATATAATGAGAATATTAGATTAAATTATAAGTG
A

Upstream 100 bases:

>100_bases
CTGTATTCACATACAAACGTCGTAAAAATTCAAAACGTAAAAAAGGCCATCGTCAACCATACACTAAATTAACAATCGAT
AAAATCAACGCGTAATTATT

Downstream 100 bases:

>100_bases
GGTGCATTCCGATGTTAAAATTAAACTTACAATTCTTCGCATCTAAAAAAGGGGTAAGTTCTACAAAAAACGGACGTGAC
TCTGAATCAAAACGCTTAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MITVDITVNDEGKVTDVIMDGHADHGEYGHDIVCAGASAVLFGSVNAIIGLTSERPDINYDDNGGHFHIRSVDTNNDEAQ
LILQTMLVSLQTIEEEYNENIRLNYK

Sequences:

>Translated_106_residues
MITVDITVNDEGKVTDVIMDGHADHGEYGHDIVCAGASAVLFGSVNAIIGLTSERPDINYDDNGGHFHIRSVDTNNDEAQ
LILQTMLVSLQTIEEEYNENIRLNYK
>Mature_106_residues
MITVDITVNDEGKVTDVIMDGHADHGEYGHDIVCAGASAVLFGSVNAIIGLTSERPDINYDDNGGHFHIRSVDTNNDEAQ
LILQTMLVSLQTIEEEYNENIRLNYK

Specific function: Unknown

COG id: COG2868

COG function: function code J; Predicted ribosomal protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.genitalium MG233 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007422 [H]

Pfam domain/function: PF04327 DUF464 [H]

EC number: NA

Molecular weight: Translated: 11692; Mature: 11692

Theoretical pI: Translated: 4.05; Mature: 4.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITVDITVNDEGKVTDVIMDGHADHGEYGHDIVCAGASAVLFGSVNAIIGLTSERPDINY
CEEEEEEECCCCCEEEEEEECCCCCCCCCCEEEECCCCEEEEECCEEEEEECCCCCCCCC
DDNGGHFHIRSVDTNNDEAQLILQTMLVSLQTIEEEYNENIRLNYK
CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEC
>Mature Secondary Structure
MITVDITVNDEGKVTDVIMDGHADHGEYGHDIVCAGASAVLFGSVNAIIGLTSERPDINY
CEEEEEEECCCCCEEEEEEECCCCCCCCCCEEEECCCCEEEEECCEEEEEECCCCCCCCC
DDNGGHFHIRSVDTNNDEAQLILQTMLVSLQTIEEEYNENIRLNYK
CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1942049; 9384377; 3918016 [H]