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The map label for this gene is 88195367

Identifier: 88195367

GI number: 88195367

Start: 1572587

End: 1573687

Strand: Reverse

Name: 88195367

Synonym: SAOUHSC_01660

Alternate gene names: NA

Gene position: 1573687-1572587 (Counterclockwise)

Preceding gene: 88195368

Following gene: 88195366

Centisome position: 55.78

GC content: 31.06

Gene sequence:

>1101_bases
ATGAAAATAGCTGATTTAATGACATTGTTAGATCATCATGTGCCATTTAGTACTGCTGAATCTTGGGATAATGTAGGATT
GTTAATAGGTGATGAAGATGTTGAAGTTACTGGTGTTTTAACAGCATTAGACTGTACGTTGGAAGTAGTAAATGAAGCAA
TCGAAAAAGGTTATAATACTATTATTAGTCATCATCCTCTAATCTTTAAAGGCGTAACATCATTAAAAGCTAATGGTTAT
GGTTTGATCATTAGAAAACTAATTCAACATGACATTAATTTAATAGCGATGCATACAAATTTAGATGTAAATCCGTATGG
TGTCAATATGATGTTGGCGAAGGCGATGGGTTTGAAGAACATTTCAATAATAAATAATCAACAAGATGTATACTATAAAG
TTCAAACATATATACCTAAGGATAATGTTGGACCATTTAAAGATAAGCTTAGTGAAAATGGATTAGCGCAAGAAGGTAAT
TATGAATATTGTTTCTTTGAAAGTGAAGGAAGAGGGCAATTCAAACCAGTTGGTGAAGCTAATCCAACAATAGGACAAAT
TGATAAAATTGAATATGTAGATGAAGTTAAAATTGAATTTATGATAGATGCATATCAAAAGTCAAGGGCTGAGCAATTAA
TTAAACAATACCATCCATATGAAACACCGGTATTTGATTTTATTGAGATAAAACAAACATCCCTTTATGGACTTGGCGTT
ATGGCAGAAGTGGATAATCAAATGACATTGGAAGATTTCGCAGCTGATATTAAATCTAAATTAAATATCCCAAGTGTCCG
TTTTGTTGGTGAGTCTAATCAGAAAATTAAACGTATTGCAATTATTGGTGGTTCAGGTATTGGATATGAATATCAAGCTG
TCCAACAAGGCGCAGATGTCTTTGTTACAGGTGATATTAAACATCATGATGCCTTAGATGCTAAAATTCATGGTGTGAAT
TTAATTGATATTAATCATTACAGCGAATATGTGATGAAAGAAGGTTTAAAAGCGTTACTAATGAATTGGTTCAATACAGA
AAAAATAAATTTAGATGTTGAAGCATCTACAATTAATACAGATCCATTTCAATATATTTAA

Upstream 100 bases:

>100_bases
CACTTTATCATATTAAATCGAAACTCAATACTGAACAACATCATCAACGTTTAGCTCAAATTAATGACGAAATTGCTGTA
ATTGAAAGGGTGTTATAGTA

Downstream 100 bases:

>100_bases
ACTAAAATCTCGGGATTTCTAAATTTTGAAATTTCGAGGTTTTAATATTTTTATTTAAAATAGCACATTTATACTTTATA
ATAGTAAAGATGAACATATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MKIADLMTLLDHHVPFSTAESWDNVGLLIGDEDVEVTGVLTALDCTLEVVNEAIEKGYNTIISHHPLIFKGVTSLKANGY
GLIIRKLIQHDINLIAMHTNLDVNPYGVNMMLAKAMGLKNISIINNQQDVYYKVQTYIPKDNVGPFKDKLSENGLAQEGN
YEYCFFESEGRGQFKPVGEANPTIGQIDKIEYVDEVKIEFMIDAYQKSRAEQLIKQYHPYETPVFDFIEIKQTSLYGLGV
MAEVDNQMTLEDFAADIKSKLNIPSVRFVGESNQKIKRIAIIGGSGIGYEYQAVQQGADVFVTGDIKHHDALDAKIHGVN
LIDINHYSEYVMKEGLKALLMNWFNTEKINLDVEASTINTDPFQYI

Sequences:

>Translated_366_residues
MKIADLMTLLDHHVPFSTAESWDNVGLLIGDEDVEVTGVLTALDCTLEVVNEAIEKGYNTIISHHPLIFKGVTSLKANGY
GLIIRKLIQHDINLIAMHTNLDVNPYGVNMMLAKAMGLKNISIINNQQDVYYKVQTYIPKDNVGPFKDKLSENGLAQEGN
YEYCFFESEGRGQFKPVGEANPTIGQIDKIEYVDEVKIEFMIDAYQKSRAEQLIKQYHPYETPVFDFIEIKQTSLYGLGV
MAEVDNQMTLEDFAADIKSKLNIPSVRFVGESNQKIKRIAIIGGSGIGYEYQAVQQGADVFVTGDIKHHDALDAKIHGVN
LIDINHYSEYVMKEGLKALLMNWFNTEKINLDVEASTINTDPFQYI
>Mature_366_residues
MKIADLMTLLDHHVPFSTAESWDNVGLLIGDEDVEVTGVLTALDCTLEVVNEAIEKGYNTIISHHPLIFKGVTSLKANGY
GLIIRKLIQHDINLIAMHTNLDVNPYGVNMMLAKAMGLKNISIINNQQDVYYKVQTYIPKDNVGPFKDKLSENGLAQEGN
YEYCFFESEGRGQFKPVGEANPTIGQIDKIEYVDEVKIEFMIDAYQKSRAEQLIKQYHPYETPVFDFIEIKQTSLYGLGV
MAEVDNQMTLEDFAADIKSKLNIPSVRFVGESNQKIKRIAIIGGSGIGYEYQAVQQGADVFVTGDIKHHDALDAKIHGVN
LIDINHYSEYVMKEGLKALLMNWFNTEKINLDVEASTINTDPFQYI

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Homo sapiens, GI209862879, Length=379, Percent_Identity=26.6490765171504, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI215272360, Length=379, Percent_Identity=26.9129287598945, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI56605983, Length=379, Percent_Identity=26.9129287598945, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI215272362, Length=120, Percent_Identity=35.8333333333333, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI19921430, Length=122, Percent_Identity=37.7049180327869, Blast_Score=73, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678
- InterPro:   IPR017221 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 41153; Mature: 41153

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIADLMTLLDHHVPFSTAESWDNVGLLIGDEDVEVTGVLTALDCTLEVVNEAIEKGYNT
CCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH
IISHHPLIFKGVTSLKANGYGLIIRKLIQHDINLIAMHTNLDVNPYGVNMMLAKAMGLKN
HHHCCCEEEECHHHHCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHCCCCC
ISIINNQQDVYYKVQTYIPKDNVGPFKDKLSENGLAQEGNYEYCFFESEGRGQFKPVGEA
EEEECCCCCEEEEEEEECCCCCCCHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCC
NPTIGQIDKIEYVDEVKIEFMIDAYQKSRAEQLIKQYHPYETPVFDFIEIKQTSLYGLGV
CCCCCCCHHEHHHHHEEEEEEEEHHHHHHHHHHHHHHCCCCCCCCHHEEEECCEEEEEEE
MAEVDNQMTLEDFAADIKSKLNIPSVRFVGESNQKIKRIAIIGGSGIGYEYQAVQQGADV
EEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEECCCCCCCCHHHHHCCCCE
FVTGDIKHHDALDAKIHGVNLIDINHYSEYVMKEGLKALLMNWFNTEKINLDVEASTINT
EEECCCCCCCCCCCEEECEEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECC
DPFQYI
CCCCCC
>Mature Secondary Structure
MKIADLMTLLDHHVPFSTAESWDNVGLLIGDEDVEVTGVLTALDCTLEVVNEAIEKGYNT
CCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH
IISHHPLIFKGVTSLKANGYGLIIRKLIQHDINLIAMHTNLDVNPYGVNMMLAKAMGLKN
HHHCCCEEEECHHHHCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHCCCCC
ISIINNQQDVYYKVQTYIPKDNVGPFKDKLSENGLAQEGNYEYCFFESEGRGQFKPVGEA
EEEECCCCCEEEEEEEECCCCCCCHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCC
NPTIGQIDKIEYVDEVKIEFMIDAYQKSRAEQLIKQYHPYETPVFDFIEIKQTSLYGLGV
CCCCCCCHHEHHHHHEEEEEEEEHHHHHHHHHHHHHHCCCCCCCCHHEEEECCEEEEEEE
MAEVDNQMTLEDFAADIKSKLNIPSVRFVGESNQKIKRIAIIGGSGIGYEYQAVQQGADV
EEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEECCCCCCCCHHHHHCCCCE
FVTGDIKHHDALDAKIHGVNLIDINHYSEYVMKEGLKALLMNWFNTEKINLDVEASTINT
EEECCCCCCCCCCCEEECEEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECC
DPFQYI
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11418146 [H]