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The map label for this gene is 88195252

Identifier: 88195252

GI number: 88195252

Start: 1487693

End: 1487998

Strand: Reverse

Name: 88195252

Synonym: SAOUHSC_01539

Alternate gene names: NA

Gene position: 1487998-1487693 (Counterclockwise)

Preceding gene: 88195253

Following gene: 88195251

Centisome position: 52.74

GC content: 29.41

Gene sequence:

>306_bases
ATGAAATTAACAAAAAAACAGCTGAAAGAATATATAGAGGATTATAAAAAATCTGATGACATATTAATTAATTTGTATAT
AGAAACGTATGAATTTTATTGTCGGTTAAGAGATGAACTTAAAAATAGTGATTTGATGATAGAGCATACAAACAAGGCTG
GTGCGAGCAATATTGTTAAGAATCCATTAAGCATAGAACTGACAAAAACAGTTCAAACACTAAATAACTTACTCAAGTCT
ATGGGTTTAACTGCAGCACAAAGAAAAAAGATAGTTCAAGAAGAAGGTGGATTCGGTGACTATTAA

Upstream 100 bases:

>100_bases
ATAGCCCCCTACCCATCGGCTTAAAATGTTTTTTCGACGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTT
TTATGAAAGGGGGTCTTTAT

Downstream 100 bases:

>100_bases
AGTTTTAAATGAACCTTCACCAAAACTATTAACAACATGGTATGCAGAGCAAGTCACTCAAGGGAAAATAAAAACAAGCA
AATATGTTAAAAAAGAATGT

Product: terminase-small subunit

Products: NA

Alternate protein names: Phage Terminase Small Subunit

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MKLTKKQLKEYIEDYKKSDDILINLYIETYEFYCRLRDELKNSDLMIEHTNKAGASNIVKNPLSIELTKTVQTLNNLLKS
MGLTAAQRKKIVQEEGGFGDY

Sequences:

>Translated_101_residues
MKLTKKQLKEYIEDYKKSDDILINLYIETYEFYCRLRDELKNSDLMIEHTNKAGASNIVKNPLSIELTKTVQTLNNLLKS
MGLTAAQRKKIVQEEGGFGDY
>Mature_101_residues
MKLTKKQLKEYIEDYKKSDDILINLYIETYEFYCRLRDELKNSDLMIEHTNKAGASNIVKNPLSIELTKTVQTLNNLLKS
MGLTAAQRKKIVQEEGGFGDY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11708; Mature: 11708

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTKKQLKEYIEDYKKSDDILINLYIETYEFYCRLRDELKNSDLMIEHTNKAGASNIVK
CCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHC
NPLSIELTKTVQTLNNLLKSMGLTAAQRKKIVQEEGGFGDY
CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKLTKKQLKEYIEDYKKSDDILINLYIETYEFYCRLRDELKNSDLMIEHTNKAGASNIVK
CCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHC
NPLSIELTKTVQTLNNLLKSMGLTAAQRKKIVQEEGGFGDY
CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA