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The map label for this gene is clpP [H]

Identifier: 88195249

GI number: 88195249

Start: 1484012

End: 1484785

Strand: Reverse

Name: clpP [H]

Synonym: SAOUHSC_01536

Alternate gene names: 88195249

Gene position: 1484785-1484012 (Counterclockwise)

Preceding gene: 88195250

Following gene: 88195248

Centisome position: 52.63

GC content: 31.14

Gene sequence:

>774_bases
ATGTCAATGAAAGCTAAGTATTTTCAAATGAAAAGAAAATCAAAAAGTAAAGGTGAAATATTCATTTATGGTGATATTGT
AAGTGATAAATGGTTTGAAAGTGATGTAACTGCTACAGATTTCAAAAATAAACTAGATGAACTAGGAGACATCAGTGAAA
TAGATGTTCATATAAATTCATCTGGAGGCAGTGTATTTGAAGGACATGCAATATACAATATGCTAAAAATGCATCCTGCA
AAAATTAATATCTATGTCGATGCCTTAGCGGCATCAATTGCTAGTGTTATCGCTATGAGTGGTGACACTATTTTTATGCA
CAAAAATAGTTTTTTAATGATTCATAATTCATGGGTTATGACTGTAGGTAATGCAGAAGAATTAAGAAAGACAGCGGATT
TACTTGAAAAAACAGATGCTGTTAGTAATTCAGCTTATTTAGATAAAGCAAAAGATTTAGATCAAGAACACTTAAAACAG
ATGTTAGATGCAGAAACTTGGCTTACTGCAGAAGAAGCCTTGTCTTTCGGCTTGATAGATGAAATTTTAGGAGCTAATGA
AATAGCTGCTAGTATCTCTAAAGAGCAATATAAGCGTTTCGAGAACGTCCCAGAAGATTTAAAGAAAGATGTAGACAAAA
TCACTAAAATTGATGATGTAGATACATCTGAATTGGTTGAAACACCTAAAGAAAGTATGTCACTAGAAGAAAAAGAAAAA
AGAGAAAAAATTAAACGCGAATGCGAAATTTTAAAAATGACAATGAATTATTAG

Upstream 100 bases:

>100_bases
CCACCAGTTGAAGGTGGAGATAAGCCGCTAATAAGCGGTGATTTATACCCAATTGACACGCCACTTGAATTAAGAAAATC
TTTGAAAGGTGGTGATAAAA

Downstream 100 bases:

>100_bases
GAGGAAATGAAATGCCGACATTATATGAATTAAAACAATCCTTAGGTATGATTGGACAACAATTAAAAAATAAAAATGAT
GAATTGAGTCAGAAAGCAAC

Product: scaffolding protease

Products: NA

Alternate protein names: Endopeptidase Clp [H]

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MSMKAKYFQMKRKSKSKGEIFIYGDIVSDKWFESDVTATDFKNKLDELGDISEIDVHINSSGGSVFEGHAIYNMLKMHPA
KINIYVDALAASIASVIAMSGDTIFMHKNSFLMIHNSWVMTVGNAEELRKTADLLEKTDAVSNSAYLDKAKDLDQEHLKQ
MLDAETWLTAEEALSFGLIDEILGANEIAASISKEQYKRFENVPEDLKKDVDKITKIDDVDTSELVETPKESMSLEEKEK
REKIKRECEILKMTMNY

Sequences:

>Translated_257_residues
MSMKAKYFQMKRKSKSKGEIFIYGDIVSDKWFESDVTATDFKNKLDELGDISEIDVHINSSGGSVFEGHAIYNMLKMHPA
KINIYVDALAASIASVIAMSGDTIFMHKNSFLMIHNSWVMTVGNAEELRKTADLLEKTDAVSNSAYLDKAKDLDQEHLKQ
MLDAETWLTAEEALSFGLIDEILGANEIAASISKEQYKRFENVPEDLKKDVDKITKIDDVDTSELVETPKESMSLEEKEK
REKIKRECEILKMTMNY
>Mature_256_residues
SMKAKYFQMKRKSKSKGEIFIYGDIVSDKWFESDVTATDFKNKLDELGDISEIDVHINSSGGSVFEGHAIYNMLKMHPAK
INIYVDALAASIASVIAMSGDTIFMHKNSFLMIHNSWVMTVGNAEELRKTADLLEKTDAVSNSAYLDKAKDLDQEHLKQM
LDAETWLTAEEALSFGLIDEILGANEIAASISKEQYKRFENVPEDLKKDVDKITKIDDVDTSELVETPKESMSLEEKEKR
EKIKRECEILKMTMNY

Specific function: Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins [H]

COG id: COG0740

COG function: function code OU; Protease subunit of ATP-dependent Clp proteases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S14 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001907
- InterPro:   IPR018215 [H]

Pfam domain/function: PF00574 CLP_protease [H]

EC number: =3.4.21.92 [H]

Molecular weight: Translated: 29171; Mature: 29039

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMKAKYFQMKRKSKSKGEIFIYGDIVSDKWFESDVTATDFKNKLDELGDISEIDVHINS
CCCCHHHHHHHHCCCCCCCEEEEEEECCCCHHCCCCCHHHHHHHHHHHCCCEEEEEEEEC
SGGSVFEGHAIYNMLKMHPAKINIYVDALAASIASVIAMSGDTIFMHKNSFLMIHNSWVM
CCCCEEEHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCEEE
TVGNAEELRKTADLLEKTDAVSNSAYLDKAKDLDQEHLKQMLDAETWLTAEEALSFGLID
EECCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EILGANEIAASISKEQYKRFENVPEDLKKDVDKITKIDDVDTSELVETPKESMSLEEKEK
HHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHCCHHHCCHHHHHH
REKIKRECEILKMTMNY
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SMKAKYFQMKRKSKSKGEIFIYGDIVSDKWFESDVTATDFKNKLDELGDISEIDVHINS
CCCHHHHHHHHCCCCCCCEEEEEEECCCCHHCCCCCHHHHHHHHHHHCCCEEEEEEEEC
SGGSVFEGHAIYNMLKMHPAKINIYVDALAASIASVIAMSGDTIFMHKNSFLMIHNSWVM
CCCCEEEHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCEEE
TVGNAEELRKTADLLEKTDAVSNSAYLDKAKDLDQEHLKQMLDAETWLTAEEALSFGLID
EECCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EILGANEIAASISKEQYKRFENVPEDLKKDVDKITKIDDVDTSELVETPKESMSLEEKEK
HHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHCCHHHCCHHHHHH
REKIKRECEILKMTMNY
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA