Click here to switch to the map view.

The map label for this gene is 88195234

Identifier: 88195234

GI number: 88195234

Start: 1467209

End: 1468675

Strand: Reverse

Name: 88195234

Synonym: SAOUHSC_01520

Alternate gene names: NA

Gene position: 1468675-1467209 (Counterclockwise)

Preceding gene: 88195235

Following gene: 88195233

Centisome position: 52.06

GC content: 33.33

Gene sequence:

>1467_bases
ATGAGTAATTTAGAGAAATCTGTAGCTATAAATTTAGAAAACACAGCGCATTATGGAAATATTTCAAATCTAGATATAAC
TTTTAGAACAGGAGAGAGTGATTCTTCTGTTCTTCTTTTTAATATCACTAAAAATAATCAACCGTTATTATTGAGTGAAG
AAAATATCAAAGCACGAATAGCGATTCGAGGTAAAGGAGTCATGGTAGTTGCTCCACTAGAAATATTAGATCCATTTAAA
GGTATTTTAAAATTTCAATTACCTAATGATGTAATTAAACGAGATGGAAGTTATCAAGCTCAAGTTTCGGTTGCAGAATT
AGGTAATTCAGACGTGGTAGTTGTCGAGAGAACTATCACATTTAACGTTGAAAAAAGTTTGTTTAGCATGATTCCATCTG
AAACAAAATTACACTATATTGTTGAATTTCAGGAATTAGAAAAAACTATTATGGATCGTGCGAAAGCAATGGACGAGGCT
ATAAAAAATGGTGAAGATTATGCGAGTCTGATTGAAAAAGCTAAAGAAAAAGGTCTATCAGATATTCAAATAGCAAAATC
TTCAAGTATAGATGAATTAAAGCAACTTGCTAATAGCCATATATCTGATTTGGAAAATAAAGCGCAAGCATATTCAAGAA
CATTCGATGAGCAAAAGCGATATATGGATGAGAAACATGAAGCCTTCAAGCAGTCAGTGAATAGTGGTGGTTTAGTCACA
AGTGGTTCTACTTCAAATTGGCAAAAAGCTAAGATTACTAAAGATGATGGTAAGATAATGCAGATTACTGGATTTGATTT
TAATAATCCAGAACAAAGAATAGGTGATTCAACCCAATTTATTTATGTTTCGCAAGCTATAAATTATCCAAGAGGTGTTA
GTACTAACGGTACTGTCGAATATTTAGTAGTAACTTCAGATTACAAGCGTATGACTTATCGACCGAACGGTACAAATAAA
GTATTTGTTAAAAGAAAAGAAGCGGGTTCATGGTCTGAGTGGTCAGAATTAGCTATTAATGATTACAATACACCTTTTGA
AACTGTTCAAAGTGCCCAATCAAAAGCTAATATGGCCGAAAGTAACGCTAAATTATACGCAGATGACAAGTTTAATAAAA
GGTATTCGGTTATTTTTGATGGAACAGCAAATGGTGTGGGCTCTACATTGTACTTAAATGAGAGTTTAGACCAATTTATT
TTATTAATTTTTTATGGGACTTTTCCAGGTGGTGACTTTACAGAGTTTGGCAGTCCTTTTGGAGGAGGAAAGATTTCATT
GAATCCCTCAAATCTTCCAGATGGTGATGGAAATGGTGGAGGTGTTTATGAGTTTGGATTAACTAAATCTAGTCGTACAT
CTTTAACTATATCAAACGATGTCTATTTCGACTTAGGAAGTCAAAGAGGCTCTGGTGCGAACGCAAATAGAGGGACAATT
AACAAAATTATAGGAGTGAGAAAATAA

Upstream 100 bases:

>100_bases
GTAATAGTGTTACAGCATCTGCTGAGATACTATTGAAAAATTATGATAGTAAAACAAGTTCAGGGCCATGGACTTTACAC
GAAGGGAGAATTATAAGTTA

Downstream 100 bases:

>100_bases
TGCAAATATTAGTTAACAAGCGTAATGAGATAATTTCATACGCTATCATTGGTGGCTTTGAAGAAGGTATTGATATTGAA
AATTTACCAGAAAATTTCTC

Product: SLT orf 488-like protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 488; Mature: 487

Protein sequence:

>488_residues
MSNLEKSVAINLENTAHYGNISNLDITFRTGESDSSVLLFNITKNNQPLLLSEENIKARIAIRGKGVMVVAPLEILDPFK
GILKFQLPNDVIKRDGSYQAQVSVAELGNSDVVVVERTITFNVEKSLFSMIPSETKLHYIVEFQELEKTIMDRAKAMDEA
IKNGEDYASLIEKAKEKGLSDIQIAKSSSIDELKQLANSHISDLENKAQAYSRTFDEQKRYMDEKHEAFKQSVNSGGLVT
SGSTSNWQKAKITKDDGKIMQITGFDFNNPEQRIGDSTQFIYVSQAINYPRGVSTNGTVEYLVVTSDYKRMTYRPNGTNK
VFVKRKEAGSWSEWSELAINDYNTPFETVQSAQSKANMAESNAKLYADDKFNKRYSVIFDGTANGVGSTLYLNESLDQFI
LLIFYGTFPGGDFTEFGSPFGGGKISLNPSNLPDGDGNGGGVYEFGLTKSSRTSLTISNDVYFDLGSQRGSGANANRGTI
NKIIGVRK

Sequences:

>Translated_488_residues
MSNLEKSVAINLENTAHYGNISNLDITFRTGESDSSVLLFNITKNNQPLLLSEENIKARIAIRGKGVMVVAPLEILDPFK
GILKFQLPNDVIKRDGSYQAQVSVAELGNSDVVVVERTITFNVEKSLFSMIPSETKLHYIVEFQELEKTIMDRAKAMDEA
IKNGEDYASLIEKAKEKGLSDIQIAKSSSIDELKQLANSHISDLENKAQAYSRTFDEQKRYMDEKHEAFKQSVNSGGLVT
SGSTSNWQKAKITKDDGKIMQITGFDFNNPEQRIGDSTQFIYVSQAINYPRGVSTNGTVEYLVVTSDYKRMTYRPNGTNK
VFVKRKEAGSWSEWSELAINDYNTPFETVQSAQSKANMAESNAKLYADDKFNKRYSVIFDGTANGVGSTLYLNESLDQFI
LLIFYGTFPGGDFTEFGSPFGGGKISLNPSNLPDGDGNGGGVYEFGLTKSSRTSLTISNDVYFDLGSQRGSGANANRGTI
NKIIGVRK
>Mature_487_residues
SNLEKSVAINLENTAHYGNISNLDITFRTGESDSSVLLFNITKNNQPLLLSEENIKARIAIRGKGVMVVAPLEILDPFKG
ILKFQLPNDVIKRDGSYQAQVSVAELGNSDVVVVERTITFNVEKSLFSMIPSETKLHYIVEFQELEKTIMDRAKAMDEAI
KNGEDYASLIEKAKEKGLSDIQIAKSSSIDELKQLANSHISDLENKAQAYSRTFDEQKRYMDEKHEAFKQSVNSGGLVTS
GSTSNWQKAKITKDDGKIMQITGFDFNNPEQRIGDSTQFIYVSQAINYPRGVSTNGTVEYLVVTSDYKRMTYRPNGTNKV
FVKRKEAGSWSEWSELAINDYNTPFETVQSAQSKANMAESNAKLYADDKFNKRYSVIFDGTANGVGSTLYLNESLDQFIL
LIFYGTFPGGDFTEFGSPFGGGKISLNPSNLPDGDGNGGGVYEFGLTKSSRTSLTISNDVYFDLGSQRGSGANANRGTIN
KIIGVRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53969; Mature: 53838

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNLEKSVAINLENTAHYGNISNLDITFRTGESDSSVLLFNITKNNQPLLLSEENIKARI
CCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEECCCCEEEE
AIRGKGVMVVAPLEILDPFKGILKFQLPNDVIKRDGSYQAQVSVAELGNSDVVVVERTIT
EEECCCEEEEECHHHHCCHHHHEEECCCHHHHHCCCCCEEEEEHHHCCCCCEEEEEEEEE
FNVEKSLFSMIPSETKLHYIVEFQELEKTIMDRAKAMDEAIKNGEDYASLIEKAKEKGLS
EEEHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
DIQIAKSSSIDELKQLANSHISDLENKAQAYSRTFDEQKRYMDEKHEAFKQSVNSGGLVT
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
SGSTSNWQKAKITKDDGKIMQITGFDFNNPEQRIGDSTQFIYVSQAINYPRGVSTNGTVE
CCCCCCCEEEEEECCCCCEEEEECCCCCCHHHHCCCCEEEEEEEECCCCCCCCCCCCCEE
YLVVTSDYKRMTYRPNGTNKVFVKRKEAGSWSEWSELAINDYNTPFETVQSAQSKANMAE
EEEEECCCEEEEECCCCCCEEEEEECCCCCCCHHHHHEECCCCCHHHHHHHHHHHHHHHH
SNAKLYADDKFNKRYSVIFDGTANGVGSTLYLNESLDQFILLIFYGTFPGGDFTEFGSPF
CCCEEEECCCCCCEEEEEECCCCCCCCEEEEECCCHHHEEEEEEEECCCCCCHHHCCCCC
GGGKISLNPSNLPDGDGNGGGVYEFGLTKSSRTSLTISNDVYFDLGSQRGSGANANRGTI
CCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCEEEECCCCCCCCCCCCCCHH
NKIIGVRK
HHHHCCCC
>Mature Secondary Structure 
SNLEKSVAINLENTAHYGNISNLDITFRTGESDSSVLLFNITKNNQPLLLSEENIKARI
CCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEECCCCEEEE
AIRGKGVMVVAPLEILDPFKGILKFQLPNDVIKRDGSYQAQVSVAELGNSDVVVVERTIT
EEECCCEEEEECHHHHCCHHHHEEECCCHHHHHCCCCCEEEEEHHHCCCCCEEEEEEEEE
FNVEKSLFSMIPSETKLHYIVEFQELEKTIMDRAKAMDEAIKNGEDYASLIEKAKEKGLS
EEEHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
DIQIAKSSSIDELKQLANSHISDLENKAQAYSRTFDEQKRYMDEKHEAFKQSVNSGGLVT
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
SGSTSNWQKAKITKDDGKIMQITGFDFNNPEQRIGDSTQFIYVSQAINYPRGVSTNGTVE
CCCCCCCEEEEEECCCCCEEEEECCCCCCHHHHCCCCEEEEEEEECCCCCCCCCCCCCEE
YLVVTSDYKRMTYRPNGTNKVFVKRKEAGSWSEWSELAINDYNTPFETVQSAQSKANMAE
EEEEECCCEEEEECCCCCCEEEEEECCCCCCCHHHHHEECCCCCHHHHHHHHHHHHHHHH
SNAKLYADDKFNKRYSVIFDGTANGVGSTLYLNESLDQFILLIFYGTFPGGDFTEFGSPF
CCCEEEECCCCCCEEEEEECCCCCCCCEEEEECCCHHHEEEEEEEECCCCCCHHHCCCCC
GGGKISLNPSNLPDGDGNGGGVYEFGLTKSSRTSLTISNDVYFDLGSQRGSGANANRGTI
CCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCEEEECCCCCCCCCCCCCCHH
NKIIGVRK
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA