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The map label for this gene is yagU [H]

Identifier: 88193958

GI number: 88193958

Start: 157205

End: 157684

Strand: Reverse

Name: yagU [H]

Synonym: SAOUHSC_00146

Alternate gene names: 88193958

Gene position: 157684-157205 (Counterclockwise)

Preceding gene: 88193959

Following gene: 88193947

Centisome position: 5.59

GC content: 36.46

Gene sequence:

>480_bases
ATGGGTATATTCATTTATGCTGGAATTATCGGTGGCTTGTTATCTGGAATTGTAAAATTAGGTTGGGAGGTCATGTTTCC
ACCTCGCACACCAGAACGTAATGCAACGAACCCACCTCAAGAGTTATTGCAACAATTAGGATTTAGTAGTGAGTTTACGC
ATCAAACATATACATTTTCAAATATGGAATTGCCTTGGGTAAGCTTTATTGTCCACTTTAGTTTTTCTATCGTCATTGCA
ATTATTTACTGCATATTAGTTAAAAAATACGCTTACTTAGCAATGGGACAAGGTGCTGTTTTTGGTATTGCTATTTGGGT
ATTATTCCACCTTATCATTATGCCAATCATGCATACTGTACCTGCTGTGTGGGATCAACCATTCCAAGAGCATCTGTCAG
AATTCTTTGGCCATATCGTCTGGATGATGACAATTGAATTAGTGCGACAACATTTTGTCTATCGCTATAAATTAAATTAA

Upstream 100 bases:

>100_bases
TATTTTAAGTTTTGCAAAGCTTTTTATTGTGATTATTTTCACAAAATACTATAATGAGGATAGTAAATAGAGAGGAGTCC
TTAAGTTGACGAAACGACAA

Downstream 100 bases:

>100_bases
TACACTGACTAACATTAACGTGAGTTTTAAATCATCGTTTGAGTATGATGATTGATGCTCACGTTATTTTATTAACTGAC
ATGATATGATTCCAGCCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MGIFIYAGIIGGLLSGIVKLGWEVMFPPRTPERNATNPPQELLQQLGFSSEFTHQTYTFSNMELPWVSFIVHFSFSIVIA
IIYCILVKKYAYLAMGQGAVFGIAIWVLFHLIIMPIMHTVPAVWDQPFQEHLSEFFGHIVWMMTIELVRQHFVYRYKLN

Sequences:

>Translated_159_residues
MGIFIYAGIIGGLLSGIVKLGWEVMFPPRTPERNATNPPQELLQQLGFSSEFTHQTYTFSNMELPWVSFIVHFSFSIVIA
IIYCILVKKYAYLAMGQGAVFGIAIWVLFHLIIMPIMHTVPAVWDQPFQEHLSEFFGHIVWMMTIELVRQHFVYRYKLN
>Mature_158_residues
GIFIYAGIIGGLLSGIVKLGWEVMFPPRTPERNATNPPQELLQQLGFSSEFTHQTYTFSNMELPWVSFIVHFSFSIVIAI
IYCILVKKYAYLAMGQGAVFGIAIWVLFHLIIMPIMHTVPAVWDQPFQEHLSEFFGHIVWMMTIELVRQHFVYRYKLN

Specific function: Unknown

COG id: COG3477

COG function: function code S; Predicted periplasmic/secreted protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786481, Length=176, Percent_Identity=31.25, Blast_Score=94, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009898 [H]

Pfam domain/function: PF07274 DUF1440 [H]

EC number: NA

Molecular weight: Translated: 18416; Mature: 18285

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIFIYAGIIGGLLSGIVKLGWEVMFPPRTPERNATNPPQELLQQLGFSSEFTHQTYTFS
CCEEHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEC
NMELPWVSFIVHFSFSIVIAIIYCILVKKYAYLAMGQGAVFGIAIWVLFHLIIMPIMHTV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
PAVWDQPFQEHLSEFFGHIVWMMTIELVRQHFVYRYKLN
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GIFIYAGIIGGLLSGIVKLGWEVMFPPRTPERNATNPPQELLQQLGFSSEFTHQTYTFS
CEEHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEC
NMELPWVSFIVHFSFSIVIAIIYCILVKKYAYLAMGQGAVFGIAIWVLFHLIIMPIMHTV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
PAVWDQPFQEHLSEFFGHIVWMMTIELVRQHFVYRYKLN
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]