| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87201295
Identifier: 87201295
GI number: 87201295
Start: 3502808
End: 3503434
Strand: Direct
Name: 87201295
Synonym: Saro_3283
Alternate gene names: NA
Gene position: 3502808-3503434 (Clockwise)
Preceding gene: 87201292
Following gene: 87201301
Centisome position: 98.35
GC content: 68.1
Gene sequence:
>627_bases ATGTGCAACCTGTATCGCATGACCAGCAACGCGCAAGCCATCGCGCGGTTGTTCGCCCCGCTGGCAAACCCGCAGGCGAA CCTGCCGGTCTTCGAAGAGGTCTATCCCGGGCACGAGGCGCCGGTGCTGGTGCAGGACGGTGGGGCACGCCGGATCGGGA CGATGCGCTGGGGCTGGCCGCCGTTCGGCGAAATCAGGCGCCCGGTCACCAACATCCGCAACCTTGCCTCGCCGATGTGG CGATCCGCGCTGGCCGATCCGGCGCGGCGATGCCTGGTGCCGGTCACGGCCTTTTCGGAATGGTCGCAGACCCCCGACCC TGCGACCAGACGCAAGCGCAAGCACTGGTTCGCGCTCAAGGACCAGCCGCTCTTCGCCTTCGCCGGCCTTTGGCGACCTG CAAACGACGGCGCGCGCTTTGCATTCCTCACATGCGAGGCGAATGCCACGGTCGGGCGCGTGCATCCCAAGGCCATGCCG GTGATCCTCGGCACGGCACAGGACGCCACGCGCTGGCTCACGGCCGACGGTGCTGAGGCGGCGGCGATGCAGCGCGCCTA TGCCGACGAAGCGATGGTCGAAGTGGAGATTGCCGATCCCCCACCGGTGCAGCCGAGCCTGTTCTGA
Upstream 100 bases:
>100_bases GGCCGCCAGTTCCTGCCGGGCATGCCATTCGGCATCGCTGCATTCGATGTTGGGCCTGAGGTGGGTAGCCATCGCTCGCT CTCCGGATATTATCGTTTCT
Downstream 100 bases:
>100_bases AGCCTACTTGTGGTCGTCTTCCCAGCGGCGCAGCACGCGCTGCTCGACCGCGCGGAACAGGGCGTCGAGATCTTCCGGGC TGACGTCGAGGACTTCGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MCNLYRMTSNAQAIARLFAPLANPQANLPVFEEVYPGHEAPVLVQDGGARRIGTMRWGWPPFGEIRRPVTNIRNLASPMW RSALADPARRCLVPVTAFSEWSQTPDPATRRKRKHWFALKDQPLFAFAGLWRPANDGARFAFLTCEANATVGRVHPKAMP VILGTAQDATRWLTADGAEAAAMQRAYADEAMVEVEIADPPPVQPSLF
Sequences:
>Translated_208_residues MCNLYRMTSNAQAIARLFAPLANPQANLPVFEEVYPGHEAPVLVQDGGARRIGTMRWGWPPFGEIRRPVTNIRNLASPMW RSALADPARRCLVPVTAFSEWSQTPDPATRRKRKHWFALKDQPLFAFAGLWRPANDGARFAFLTCEANATVGRVHPKAMP VILGTAQDATRWLTADGAEAAAMQRAYADEAMVEVEIADPPPVQPSLF >Mature_208_residues MCNLYRMTSNAQAIARLFAPLANPQANLPVFEEVYPGHEAPVLVQDGGARRIGTMRWGWPPFGEIRRPVTNIRNLASPMW RSALADPARRCLVPVTAFSEWSQTPDPATRRKRKHWFALKDQPLFAFAGLWRPANDGARFAFLTCEANATVGRVHPKAMP VILGTAQDATRWLTADGAEAAAMQRAYADEAMVEVEIADPPPVQPSLF
Specific function: Unknown
COG id: COG2135
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23051; Mature: 23051
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCNLYRMTSNAQAIARLFAPLANPQANLPVFEEVYPGHEAPVLVQDGGARRIGTMRWGWP CCCEEECCCCHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCEEEECCCCCEECCCCCCCC PFGEIRRPVTNIRNLASPMWRSALADPARRCLVPVTAFSEWSQTPDPATRRKRKHWFALK CHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHEECHHHHHHCCCCCCHHHHHHHHHEEEEC DQPLFAFAGLWRPANDGARFAFLTCEANATVGRVHPKAMPVILGTAQDATRWLTADGAEA CCCEEEECCCCCCCCCCCEEEEEEEECCCCEEEECCCCCEEEEECCCCHHHEEECCCHHH AAMQRAYADEAMVEVEIADPPPVQPSLF HHHHHHHHCCEEEEEEECCCCCCCCCCC >Mature Secondary Structure MCNLYRMTSNAQAIARLFAPLANPQANLPVFEEVYPGHEAPVLVQDGGARRIGTMRWGWP CCCEEECCCCHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCEEEECCCCCEECCCCCCCC PFGEIRRPVTNIRNLASPMWRSALADPARRCLVPVTAFSEWSQTPDPATRRKRKHWFALK CHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHEECHHHHHHCCCCCCHHHHHHHHHEEEEC DQPLFAFAGLWRPANDGARFAFLTCEANATVGRVHPKAMPVILGTAQDATRWLTADGAEA CCCEEEECCCCCCCCCCCEEEEEEEECCCCEEEECCCCCEEEEECCCCHHHEEECCCHHH AAMQRAYADEAMVEVEIADPPPVQPSLF HHHHHHHHCCEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA