| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is cysD [H]
Identifier: 87201264
GI number: 87201264
Start: 3471830
End: 3472744
Strand: Direct
Name: cysD [H]
Synonym: Saro_3252
Alternate gene names: 87201264
Gene position: 3471830-3472744 (Clockwise)
Preceding gene: 87201260
Following gene: 87201265
Centisome position: 97.48
GC content: 64.92
Gene sequence:
>915_bases GTGACACCTGACCGCAGTACCCTGACGCATCTCCAGCGCCTCGAATCCGAAGCGATCCACATCATGCGCGAGGTCGTGGC CGAGGCCGAGAACCCCGTGATGCTCTATTCGGTGGGCAAGGACAGCGCGGTGATGCTGCACCTCGCACGCAAGGCTTTCT ACCCCTCGCCGCCGCCGTTCCCGCTGCTCCACGTCGACACCACGTGGAAGTTCAGGGCGATGTACGACCTGCGCGACCGC ATGGCGAAGGAGAGCGGCATGGAGCTGCTCGTCTATCAGAATCCCGAGGCGGCCGAGCGCGGCATCAACCCGTTCGACCA CGGCGCGCTCCACACCGACATGTGGAAGACCGAAGGGCTCAAGCAGGCGCTCGACAAGTGGGGCTTCGACGCGGCCTTCG GCGGCGCACGCCGCGACGAGGAGAAGAGCCGCGCCAAGGAACGCATCTTCTCGTTCCGCACCGCCTCGCACGGCTGGGAC CCCAAGAACCAGCGGCCCGAGCTGTGGAACCTCTACAATGCCCGCAAGAACAAGGGCGAGAGCATCCGCGTCTTCCCGAT CTCGAACTGGACCGAGCTCGACATCTGGCAGTACATCCATCTCAACGACGTGCCGATCGTCCCGCTCTACTTCGCGGAAG AACGTCCCACGGTCGAGCGCGACGGCATGCTGCTGATGGTCGACGACGACCGCTTCCCGCTCAAGCCGGGCGAGACGCCG CAGATGCGTTCGATCCGTTTCCGCACGCTCGGCTGCTATCCGCTGACCGGCGCCGTGGAAAGCACCGCCAAGACGCTTCC GGAAGTGATCCAGGAAACCCTGCTCACCACCACCAGCGAACGCCAGGGCCGCGCAATCGACAAGGACGCCGGCGGCGCGG GCATGGAAGTCAAGAAGCAGCAGGGGTATTTCTGA
Upstream 100 bases:
>100_bases AGCGCCTCCAAGATTTCCATCCGTGCGCGCTCCCATCTGGGAGCGCAAGAAGGCCGCGCGATTCGCCAGACGGGGCCAGC GCAATACCGGAGCGAGAACC
Downstream 100 bases:
>100_bases TGACCGACACGATCACCACGGAACAGCCCGTCTACGTCACCGACGCACTCATCGCCGAGGACATCGACCAGTACCTCAAG GTGCATGAGCACAAGACGAT
Product: sulfate adenylyltransferase subunit 2
Products: NA
Alternate protein names: ATP-sulfurylase small subunit; Sulfate adenylate transferase; SAT [H]
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MTPDRSTLTHLQRLESEAIHIMREVVAEAENPVMLYSVGKDSAVMLHLARKAFYPSPPPFPLLHVDTTWKFRAMYDLRDR MAKESGMELLVYQNPEAAERGINPFDHGALHTDMWKTEGLKQALDKWGFDAAFGGARRDEEKSRAKERIFSFRTASHGWD PKNQRPELWNLYNARKNKGESIRVFPISNWTELDIWQYIHLNDVPIVPLYFAEERPTVERDGMLLMVDDDRFPLKPGETP QMRSIRFRTLGCYPLTGAVESTAKTLPEVIQETLLTTTSERQGRAIDKDAGGAGMEVKKQQGYF
Sequences:
>Translated_304_residues MTPDRSTLTHLQRLESEAIHIMREVVAEAENPVMLYSVGKDSAVMLHLARKAFYPSPPPFPLLHVDTTWKFRAMYDLRDR MAKESGMELLVYQNPEAAERGINPFDHGALHTDMWKTEGLKQALDKWGFDAAFGGARRDEEKSRAKERIFSFRTASHGWD PKNQRPELWNLYNARKNKGESIRVFPISNWTELDIWQYIHLNDVPIVPLYFAEERPTVERDGMLLMVDDDRFPLKPGETP QMRSIRFRTLGCYPLTGAVESTAKTLPEVIQETLLTTTSERQGRAIDKDAGGAGMEVKKQQGYF >Mature_303_residues TPDRSTLTHLQRLESEAIHIMREVVAEAENPVMLYSVGKDSAVMLHLARKAFYPSPPPFPLLHVDTTWKFRAMYDLRDRM AKESGMELLVYQNPEAAERGINPFDHGALHTDMWKTEGLKQALDKWGFDAAFGGARRDEEKSRAKERIFSFRTASHGWDP KNQRPELWNLYNARKNKGESIRVFPISNWTELDIWQYIHLNDVPIVPLYFAEERPTVERDGMLLMVDDDRFPLKPGETPQ MRSIRFRTLGCYPLTGAVESTAKTLPEVIQETLLTTTSERQGRAIDKDAGGAGMEVKKQQGYF
Specific function: First step in the sulfate activation pathway. This reaction occurs early in the reductive branch of the cysteine biosynthetic pathway. [C]
COG id: COG0175
COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAPS reductase family. CysD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789109, Length=302, Percent_Identity=71.523178807947, Blast_Score=453, Evalue=1e-129,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002500 - InterPro: IPR014729 - InterPro: IPR011784 [H]
Pfam domain/function: PF01507 PAPS_reduct [H]
EC number: =2.7.7.4 [H]
Molecular weight: Translated: 34901; Mature: 34770
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPDRSTLTHLQRLESEAIHIMREVVAEAENPVMLYSVGKDSAVMLHLARKAFYPSPPPF CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCC PLLHVDTTWKFRAMYDLRDRMAKESGMELLVYQNPEAAERGINPFDHGALHTDMWKTEGL CEEEECCCEEEEHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCCCCCCCCCHHHHHHHHH KQALDKWGFDAAFGGARRDEEKSRAKERIFSFRTASHGWDPKNQRPELWNLYNARKNKGE HHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCC SIRVFPISNWTELDIWQYIHLNDVPIVPLYFAEERPTVERDGMLLMVDDDRFPLKPGETP EEEEEECCCCCEECEEEEEEECCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCC QMRSIRFRTLGCYPLTGAVESTAKTLPEVIQETLLTTTSERQGRAIDKDAGGAGMEVKKQ CHHEEEEEEECCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEHHC QGYF CCCC >Mature Secondary Structure TPDRSTLTHLQRLESEAIHIMREVVAEAENPVMLYSVGKDSAVMLHLARKAFYPSPPPF CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCC PLLHVDTTWKFRAMYDLRDRMAKESGMELLVYQNPEAAERGINPFDHGALHTDMWKTEGL CEEEECCCEEEEHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCCCCCCCCCHHHHHHHHH KQALDKWGFDAAFGGARRDEEKSRAKERIFSFRTASHGWDPKNQRPELWNLYNARKNKGE HHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCC SIRVFPISNWTELDIWQYIHLNDVPIVPLYFAEERPTVERDGMLLMVDDDRFPLKPGETP EEEEEECCCCCEECEEEEEEECCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCC QMRSIRFRTLGCYPLTGAVESTAKTLPEVIQETLLTTTSERQGRAIDKDAGGAGMEVKKQ CHHEEEEEEECCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEHHC QGYF CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11259647 [H]