| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
Click here to switch to the map view.
The map label for this gene is uppP
Identifier: 87201196
GI number: 87201196
Start: 3405807
End: 3406619
Strand: Direct
Name: uppP
Synonym: Saro_3184
Alternate gene names: 87201196
Gene position: 3405807-3406619 (Clockwise)
Preceding gene: 87201195
Following gene: 87201197
Centisome position: 95.63
GC content: 65.56
Gene sequence:
>813_bases ATGGACACGATCGTAACCGCAATCCTGCTCGGCATCGTCGAGGGCCTCACCGAATTCCTGCCCGTCTCATCGACCGGCCA CCTGATCCTTGCAACCGAGCTGTTCGGCTATGACGCGCACCAGTGGGCGATGTTCAACGTCGTGATCCAGCTTGGCGCGA TCCTGGCGGTGGTGGTCCAGTACTGGCGGACGTTCTGGGCGGTCGGCATGGGCCTGCTCAGGCTTGAGCCGATCTCCCTG CGGTTCTTGCGCAACCTTCTGGCGGCGTTCATCCCGTCCGCAATCCTTGGCCTGGCGCTCAAGAAATACATCGATGTCCT GCTCGGCAGCCCGTCGGTGGTGTGCTGGGCGCTGATTGCGGGCGGCATCGCGATCCTCGTGATCGAGAAACACGCAAAGC AGGGCGAGCCATCGGGGATCGGACAGCTTCCACTGCGGCAGGCGATTGGCGTCGGCCTTGCGCAGTGCCTTGCGATGGTG CCGGGCGTCAGCCGATCGGGCGCGACCATCATGGGCGCTCTGGCGATGGGCATCGAGCGCCGCACGGCGGCCGAGTTCAG CTTCTTCCTCGCGATCCCGACGATGCTCGGTGCCACGACGCTCGAACTGCTCGACAACCGCGACGCGCTGCTCGGCGGCA CGATGGGCGTTGGCTGGAGCGAGATCGGCGTCGGCTTTGCGGTGTCCTTCGTGGTTGCGCTCGCGGTCATCCGACTGTTC GTCGCCTATGTCAGCCGCGCCGGGTTCAAACCTTTCGCGTGGTACCGCATTGCCGCCGGCGCAGTGGCGCTCGGCTGGCT GGCGATGCGCTGA
Upstream 100 bases:
>100_bases GCCGCGTAACCGGGCACTCGTGACGGAGACGACGCTCCGGTCGAGAATGCACCCTTCCGCTTGACTTGATGCTGCGCCGC GGCAAACCCCGAAGGCACGT
Downstream 100 bases:
>100_bases CCGAAACAGGCCCCTTTCATCGACCCGCCGCATCTGCGGAACCAAGTGCCCCGTCCGGGATTGACCGAACAGACAGCACT TCAAGGGGTTACTGAAATGG
Product: undecaprenyl-diphosphatase
Products: NA
Alternate protein names: Bacitracin resistance protein; Undecaprenyl pyrophosphate phosphatase
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MDTIVTAILLGIVEGLTEFLPVSSTGHLILATELFGYDAHQWAMFNVVIQLGAILAVVVQYWRTFWAVGMGLLRLEPISL RFLRNLLAAFIPSAILGLALKKYIDVLLGSPSVVCWALIAGGIAILVIEKHAKQGEPSGIGQLPLRQAIGVGLAQCLAMV PGVSRSGATIMGALAMGIERRTAAEFSFFLAIPTMLGATTLELLDNRDALLGGTMGVGWSEIGVGFAVSFVVALAVIRLF VAYVSRAGFKPFAWYRIAAGAVALGWLAMR
Sequences:
>Translated_270_residues MDTIVTAILLGIVEGLTEFLPVSSTGHLILATELFGYDAHQWAMFNVVIQLGAILAVVVQYWRTFWAVGMGLLRLEPISL RFLRNLLAAFIPSAILGLALKKYIDVLLGSPSVVCWALIAGGIAILVIEKHAKQGEPSGIGQLPLRQAIGVGLAQCLAMV PGVSRSGATIMGALAMGIERRTAAEFSFFLAIPTMLGATTLELLDNRDALLGGTMGVGWSEIGVGFAVSFVVALAVIRLF VAYVSRAGFKPFAWYRIAAGAVALGWLAMR >Mature_270_residues MDTIVTAILLGIVEGLTEFLPVSSTGHLILATELFGYDAHQWAMFNVVIQLGAILAVVVQYWRTFWAVGMGLLRLEPISL RFLRNLLAAFIPSAILGLALKKYIDVLLGSPSVVCWALIAGGIAILVIEKHAKQGEPSGIGQLPLRQAIGVGLAQCLAMV PGVSRSGATIMGALAMGIERRTAAEFSFFLAIPTMLGATTLELLDNRDALLGGTMGVGWSEIGVGFAVSFVVALAVIRLF VAYVSRAGFKPFAWYRIAAGAVALGWLAMR
Specific function: Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
COG id: COG1968
COG function: function code V; Uncharacterized bacitracin resistance protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the uppP family
Homologues:
Organism=Escherichia coli, GI1789437, Length=272, Percent_Identity=43.0147058823529, Blast_Score=183, Evalue=1e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): UPPP_NOVAD (Q2G3F4)
Other databases:
- EMBL: CP000248 - RefSeq: YP_498453.1 - STRING: Q2G3F4 - GeneID: 3917442 - GenomeReviews: CP000248_GR - KEGG: nar:Saro_3184 - NMPDR: fig|48935.1.peg.3004 - eggNOG: COG1968 - HOGENOM: HBG391969 - OMA: LVQCLAM - PhylomeDB: Q2G3F4 - ProtClustDB: CLSK2776066 - BioCyc: NARO279238:SARO_3184-MONOMER - GO: GO:0016311 - HAMAP: MF_01006 - InterPro: IPR003824 - TIGRFAMs: TIGR00753
Pfam domain/function: PF02673 BacA
EC number: =3.6.1.27
Molecular weight: Translated: 28716; Mature: 28716
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x165c944c)-; HASH(0x18ad04bc)-; HASH(0x18ad03a8)-; HASH(0x18ad01bc)-; HASH(0x18e3ac4c)-; HASH(0x18f34bcc)-; HASH(0x18f5a2dc)-;
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTIVTAILLGIVEGLTEFLPVSSTGHLILATELFGYDAHQWAMFNVVIQLGAILAVVVQ CHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHH YWRTFWAVGMGLLRLEPISLRFLRNLLAAFIPSAILGLALKKYIDVLLGSPSVVCWALIA HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH GGIAILVIEKHAKQGEPSGIGQLPLRQAIGVGLAQCLAMVPGVSRSGATIMGALAMGIER CCCEEEEEEHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH RTAAEFSFFLAIPTMLGATTLELLDNRDALLGGTMGVGWSEIGVGFAVSFVVALAVIRLF HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VAYVSRAGFKPFAWYRIAAGAVALGWLAMR HHHHHHCCCCCHHHHHHHHHHHHHHHHHCH >Mature Secondary Structure MDTIVTAILLGIVEGLTEFLPVSSTGHLILATELFGYDAHQWAMFNVVIQLGAILAVVVQ CHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHH YWRTFWAVGMGLLRLEPISLRFLRNLLAAFIPSAILGLALKKYIDVLLGSPSVVCWALIA HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH GGIAILVIEKHAKQGEPSGIGQLPLRQAIGVGLAQCLAMVPGVSRSGATIMGALAMGIER CCCEEEEEEHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH RTAAEFSFFLAIPTMLGATTLELLDNRDALLGGTMGVGWSEIGVGFAVSFVVALAVIRLF HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VAYVSRAGFKPFAWYRIAAGAVALGWLAMR HHHHHHCCCCCHHHHHHHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA