| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is cysQ [H]
Identifier: 87201183
GI number: 87201183
Start: 3386353
End: 3387129
Strand: Direct
Name: cysQ [H]
Synonym: Saro_3171
Alternate gene names: 87201183
Gene position: 3386353-3387129 (Clockwise)
Preceding gene: 87201179
Following gene: 87201186
Centisome position: 95.08
GC content: 71.69
Gene sequence:
>777_bases ATGATCGACTACGACCGCCTCCACGCCATCGTCCGCGCCGCAGGGGATATGGCCCTGGCCCTCTGGCCCGGCCACGGGCA CGCGCCCGAGGTGTGGGAAAAGACCCCCGGCAGCCCGGTCTGCGAGGCGGATATCGCCGTGGACACCTTCCTGAAACGCG AACTGGGCGTGCTGCTCCCATCGGCGGGCTGGCTTTCGGAAGAGACCGTGGACCATCCCGAGCGGCTCGAACGCGGGCTG TGCTGGCTGGTCGACCCGATCGACGGCACGCGCGATTTCGTGCGGGGACGACCGGGCTGGGCCGTTTCGGTCGCGCTGGT CAGCGAGGGGCGCCCGCTTATCGGCGTTCTGAGCGCGCCCGCCCGCGAGGAATACTGGTCGGCGGTGGCCGGGCGCGGAG CAACCCGCAACGGCCTGCCGCTTGCCGCCAGCACGCGCCAGGTGCTTGCCGGGGCGCGAGTGCCCGCCGACAGCCTGCCG CGCGCCGACGCGGACCTGGTGACCGTGGACAAGCCCAATTCCATCGCCCTGCGCATCGCCATGGTCGGCGCGAACGAGGC TGATCTTCTGGCAACGCTACGCTGGGGCTTCGAATGGGACATCGCCGCCGCGACCCTGATCGCGCGCGAGGCCGGGGCCG CCGTTTCCGACGCATTCGGTCAGCCGCTGGCCTACAACAAGCGCGACCCGCGCGCCTTCGGGCTGCTGGTTACGGCCCCC GCCATCCACGCGGCGGCGGTCGAACGCCTTGCCGACCGCGCCGCGAAGCTGGCGTAA
Upstream 100 bases:
>100_bases AGTGTGCTTGAAAAGGGGCGTAAACACGCGCCTAAACCAAAGTCGAGGCAGCGAGCCCCCTTGCGTCTCTCGCGGGAAGG GACCACCTGTCGAAAACCGC
Downstream 100 bases:
>100_bases CGCCGGTCAGTCGAAATCCTCGGTATCGATCGTCGGCAGCATGACCCCGGCATAGCGGTGACCGGCGACGGTCTGCTGGT TGATCAGGGCATCGACTTCG
Product: inositol monophosphatase
Products: NA
Alternate protein names: 3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase; 3'-phosphoadenosine 5'-phosphate phosphatase; PAP phosphatase; DPNPase [H]
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MIDYDRLHAIVRAAGDMALALWPGHGHAPEVWEKTPGSPVCEADIAVDTFLKRELGVLLPSAGWLSEETVDHPERLERGL CWLVDPIDGTRDFVRGRPGWAVSVALVSEGRPLIGVLSAPAREEYWSAVAGRGATRNGLPLAASTRQVLAGARVPADSLP RADADLVTVDKPNSIALRIAMVGANEADLLATLRWGFEWDIAAATLIAREAGAAVSDAFGQPLAYNKRDPRAFGLLVTAP AIHAAAVERLADRAAKLA
Sequences:
>Translated_258_residues MIDYDRLHAIVRAAGDMALALWPGHGHAPEVWEKTPGSPVCEADIAVDTFLKRELGVLLPSAGWLSEETVDHPERLERGL CWLVDPIDGTRDFVRGRPGWAVSVALVSEGRPLIGVLSAPAREEYWSAVAGRGATRNGLPLAASTRQVLAGARVPADSLP RADADLVTVDKPNSIALRIAMVGANEADLLATLRWGFEWDIAAATLIAREAGAAVSDAFGQPLAYNKRDPRAFGLLVTAP AIHAAAVERLADRAAKLA >Mature_258_residues MIDYDRLHAIVRAAGDMALALWPGHGHAPEVWEKTPGSPVCEADIAVDTFLKRELGVLLPSAGWLSEETVDHPERLERGL CWLVDPIDGTRDFVRGRPGWAVSVALVSEGRPLIGVLSAPAREEYWSAVAGRGATRNGLPLAASTRQVLAGARVPADSLP RADADLVTVDKPNSIALRIAMVGANEADLLATLRWGFEWDIAAATLIAREAGAAVSDAFGQPLAYNKRDPRAFGLLVTAP AIHAAAVERLADRAAKLA
Specific function: Converts 3'(2')-phosphoadenosine 5'-phosphate (PAP) to AMP. May also convert adenosine 3'-phosphate 5'-phosphosulfate (PAPS) to adenosine 5'-phosphosulfate (APS) [H]
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm. Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI7657236, Length=203, Percent_Identity=31.0344827586207, Blast_Score=74, Evalue=2e-13, Organism=Escherichia coli, GI1790659, Length=235, Percent_Identity=30.6382978723404, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1788882, Length=209, Percent_Identity=30.1435406698565, Blast_Score=79, Evalue=3e-16, Organism=Caenorhabditis elegans, GI193202572, Length=209, Percent_Identity=30.1435406698565, Blast_Score=81, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI6320493, Length=107, Percent_Identity=31.7757009345794, Blast_Score=66, Evalue=5e-12, Organism=Drosophila melanogaster, GI24664918, Length=252, Percent_Identity=26.1904761904762, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI21357957, Length=214, Percent_Identity=26.1682242990654, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI21357303, Length=233, Percent_Identity=27.0386266094421, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI21357329, Length=200, Percent_Identity=29, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006240 - InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.7 [H]
Molecular weight: Translated: 27471; Mature: 27471
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: PS00629 IMP_1 ; PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDYDRLHAIVRAAGDMALALWPGHGHAPEVWEKTPGSPVCEADIAVDTFLKRELGVLLP CCCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHCCCCCCCEEHHHHHHHHHHHHHHHCCC SAGWLSEETVDHPERLERGLCWLVDPIDGTRDFVRGRPGWAVSVALVSEGRPLIGVLSAP CCCCCCCCCCCCHHHHHCCCEEEECCCCCCHHHHCCCCCCEEEEEEECCCCCEEEEECCC AREEYWSAVAGRGATRNGLPLAASTRQVLAGARVPADSLPRADADLVTVDKPNSIALRIA CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEECCCCCEEEEEE MVGANEADLLATLRWGFEWDIAAATLIAREAGAAVSDAFGQPLAYNKRDPRAFGLLVTAP EECCCCHHHHEEECCCCEEHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCEEEEEECC AIHAAAVERLADRAAKLA HHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIDYDRLHAIVRAAGDMALALWPGHGHAPEVWEKTPGSPVCEADIAVDTFLKRELGVLLP CCCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHCCCCCCCEEHHHHHHHHHHHHHHHCCC SAGWLSEETVDHPERLERGLCWLVDPIDGTRDFVRGRPGWAVSVALVSEGRPLIGVLSAP CCCCCCCCCCCCHHHHHCCCEEEECCCCCCHHHHCCCCCCEEEEEEECCCCCEEEEECCC AREEYWSAVAGRGATRNGLPLAASTRQVLAGARVPADSLPRADADLVTVDKPNSIALRIA CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEECCCCCEEEEEE MVGANEADLLATLRWGFEWDIAAATLIAREAGAAVSDAFGQPLAYNKRDPRAFGLLVTAP EECCCCHHHHEEECCCCEEHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCEEEEEECC AIHAAAVERLADRAAKLA HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9020051 [H]