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The map label for this gene is 87201170

Identifier: 87201170

GI number: 87201170

Start: 3370779

End: 3371468

Strand: Reverse

Name: 87201170

Synonym: Saro_3158

Alternate gene names: NA

Gene position: 3371468-3370779 (Counterclockwise)

Preceding gene: 87201175

Following gene: 87201165

Centisome position: 94.66

GC content: 66.52

Gene sequence:

>690_bases
ATGATCGCACGCGAACTTCTCGGCACGGCCCGGGTCCCCGATGGGGAGGAATTGCGCCTTTATCGCCACGACCGCGATTT
CATGATCGTGCTCGGTCACAACGAGCTGATGAGCACGCGCCAGAACGGCTCGGAAATCGCGCTCGCCACGCAAAGTCTCG
CCCGCATCGCCAAGGCGCGGCAGCCCGCCATGCTGATCGGCGGGTACGGCATGGGCTTCACCTTGCGCGCCGCGCTCGAG
AAGCTGCCCACCGACGCGCACGTGACCGTGGCTGAACTCGTGCCGGAAATCATCGCCTGGGCGCGCGGCCCGATGAAGGA
ACTGGAGGCCGGCTGCCTGGACGACCCGCGCGTGCGCCTCGTCATGGCCGATGTTGCCGAAGTGATCTCGGCCAATGCGC
TGTCGGTGGGCGGCACGGGTTACGATGCGATCCTGCTCGATGTCGACAATGGGCCGGACGGACTGGTCCGCCATGCCAAC
AACCGCCTCTATTCGATGCGCGGCCTGCGTACCGCGATGGATGCCCTGCGTCCCGGCGGCGTGCTGGCCATCTGGTCCGC
CGCGCGCGATCCGAACTTCACTCAGCGCCTCAAGGCAGCCGGCTTTGCCGTGGACGAAGTGGAAGTGCGCGCACGCACCA
ACGGCAAGGGCGCCAAGCACGTCATCTGGTTCGCTACCGAAGCGGTCTGA

Upstream 100 bases:

>100_bases
CCGCCCTCCGTTCCCGCGCCGGCGGTTCCCGCACTGGCCTTGCCGCGCCGTGGCGGAGCTTCTAGGGCGCGGGTGATTCC
CTCGAACCGGAGCCGGCCTC

Downstream 100 bases:

>100_bases
CCGGCGGCGCGGCGGTCGGCGCTTCCCGCCCCATTCACGCAAAAGAAAAGGGCGCCGGCAACCGGCGCCCTTTTCCGCAT
CCTCTCCAAGATGCGTCTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MIARELLGTARVPDGEELRLYRHDRDFMIVLGHNELMSTRQNGSEIALATQSLARIAKARQPAMLIGGYGMGFTLRAALE
KLPTDAHVTVAELVPEIIAWARGPMKELEAGCLDDPRVRLVMADVAEVISANALSVGGTGYDAILLDVDNGPDGLVRHAN
NRLYSMRGLRTAMDALRPGGVLAIWSAARDPNFTQRLKAAGFAVDEVEVRARTNGKGAKHVIWFATEAV

Sequences:

>Translated_229_residues
MIARELLGTARVPDGEELRLYRHDRDFMIVLGHNELMSTRQNGSEIALATQSLARIAKARQPAMLIGGYGMGFTLRAALE
KLPTDAHVTVAELVPEIIAWARGPMKELEAGCLDDPRVRLVMADVAEVISANALSVGGTGYDAILLDVDNGPDGLVRHAN
NRLYSMRGLRTAMDALRPGGVLAIWSAARDPNFTQRLKAAGFAVDEVEVRARTNGKGAKHVIWFATEAV
>Mature_229_residues
MIARELLGTARVPDGEELRLYRHDRDFMIVLGHNELMSTRQNGSEIALATQSLARIAKARQPAMLIGGYGMGFTLRAALE
KLPTDAHVTVAELVPEIIAWARGPMKELEAGCLDDPRVRLVMADVAEVISANALSVGGTGYDAILLDVDNGPDGLVRHAN
NRLYSMRGLRTAMDALRPGGVLAIWSAARDPNFTQRLKAAGFAVDEVEVRARTNGKGAKHVIWFATEAV

Specific function: Unknown

COG id: COG0421

COG function: function code E; Spermidine synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24826; Mature: 24826

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIARELLGTARVPDGEELRLYRHDRDFMIVLGHNELMSTRQNGSEIALATQSLARIAKAR
CCCHHHHCCCCCCCCCCEEEEEECCCEEEEEECHHHHHHCCCCCEEEHHHHHHHHHHHCC
QPAMLIGGYGMGFTLRAALEKLPTDAHVTVAELVPEIIAWARGPMKELEAGCLDDPRVRL
CCEEEEECCCCCHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCHHHHHCCCCCCCCCEE
VMADVAEVISANALSVGGTGYDAILLDVDNGPDGLVRHANNRLYSMRGLRTAMDALRPGG
EHHHHHHHHCCCCEEECCCCCEEEEEECCCCCCHHHHHCCCCEEHHHHHHHHHHHHCCCC
VLAIWSAARDPNFTQRLKAAGFAVDEVEVRARTNGKGAKHVIWFATEAV
EEEEEECCCCCCHHHHHHHHCCEEEHEEEEEECCCCCCEEEEEEEECCC
>Mature Secondary Structure
MIARELLGTARVPDGEELRLYRHDRDFMIVLGHNELMSTRQNGSEIALATQSLARIAKAR
CCCHHHHCCCCCCCCCCEEEEEECCCEEEEEECHHHHHHCCCCCEEEHHHHHHHHHHHCC
QPAMLIGGYGMGFTLRAALEKLPTDAHVTVAELVPEIIAWARGPMKELEAGCLDDPRVRL
CCEEEEECCCCCHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCHHHHHCCCCCCCCCEE
VMADVAEVISANALSVGGTGYDAILLDVDNGPDGLVRHANNRLYSMRGLRTAMDALRPGG
EHHHHHHHHCCCCEEECCCCCEEEEEECCCCCCHHHHHCCCCEEHHHHHHHHHHHHCCCC
VLAIWSAARDPNFTQRLKAAGFAVDEVEVRARTNGKGAKHVIWFATEAV
EEEEEECCCCCCHHHHHHHHCCEEEHEEEEEECCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA