| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is wecB [H]
Identifier: 87201161
GI number: 87201161
Start: 3360447
End: 3361565
Strand: Reverse
Name: wecB [H]
Synonym: Saro_3149
Alternate gene names: 87201161
Gene position: 3361565-3360447 (Counterclockwise)
Preceding gene: 87201164
Following gene: 87201160
Centisome position: 94.38
GC content: 67.29
Gene sequence:
>1119_bases ATGGTGAAGACGATACTCGTGGTGTTCGGGACGCGGCCCGAGGCGATCAAGCTGTTTCCGGTGGTGCACGCGCTGCGTGC CGATCCGCGCTTTCGCGTGGTGACCTGCGTTTCGGCGCAGCACCGGGGGATGCTCGACCAGGTGCTGGAGATCGCGGGGA TCGTGCCCGACCACGATCTCGACCTGATGCGGCCGGACCAGACGCTCGACGCGCTGACGGCGGCGCTTCTGACGGAACTG GGCAAGGTGATGGATGCCGTGCGGCCCGACTGGGTCGTGGTCCAGGGCGATACGGCGACGGCGATGGCCGGGGCGCTGGC GGCTTATTATCGCAAGCTTCCGGTCGCGCATGTCGAGGCGGGCCTGCGCAGCCACAACATCTATCACCCGTGGCCCGAGG AGGTGAACCGCAAGATTATCGGCACGATCGCGCGGCTGCACTTCGCGCCGACCGAGGTATCGGCTGCCGCGCTCAGGGCG GAGAACGTGACCGAGGGCGTTCACGTGACCGGCAACACGGTGATCGACGCCTTGCAGTGGGTTTCGGGCCGGATTGCGGC GGAGCCGGCGCTGGCGGCGGGGCTGGCCGAGATCGAGGCGCGCTTTGCCGGCAAGCGGATCATCGGCGTAACCAGCCACC GCCGCGAGAATTTCGGCGGGGGGCTTGAGAACATCGCCGAGGCGATCCGCCGCATCGCGCAGCGGGACGACGTGGCGCTG GTCTTTCCGGTCCATCCCAACCCCAACGTGCGCAAGGTGATGGACGATGCGCTGGCGGGGCTGCCCAACGTCGCGATGAT CGAGCCGCTCGACTATCCGCACTTCGCCCGGCTGTTGTCGATCGCGGAAATCATGCTGACCGATTCGGGAGGGGTGCAGG AAGAGGCCCCCGCGCTCGGCAAGCCGGTGCTGGTCATGCGGGAGACGACCGAGCGCCCCGAGGGCGTGACCGCCGGGACC GCGCGGCTGGTGGGGACCGACGTGGACACCATCGTTACCGAAATCTTCACCCTGCTCGACGATAAGGCTGCCTATTCGGC CATGGCGCGCGCTCACAATCCCTTCGGGGATGGGCAATCTTCGCGCCGAATCGTGGAGTTGCTGGCGAATGATGGGTGA
Upstream 100 bases:
>100_bases GCGGCCTTTCATGGTTGACGCGCATGCGCGCCGACTTTGCCGTCGGCTTAAAGCGAGGCTCTTATTTCACGGTTAACACT CGCCGATTATTGGAGCGGGC
Downstream 100 bases:
>100_bases TGTGAAGCCGGACGTCTGTGTCGTCGGCCTTGGCTATATCGGACTTCCCACCGCCGCCATCATTGCCCGCGCCGGCTGCC GCGTGCTGGGCCTCGACGTT
Product: UDP-N-acetylglucosamine 2-epimerase
Products: NA
Alternate protein names: UDP-GlcNAc-2-epimerase [H]
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MVKTILVVFGTRPEAIKLFPVVHALRADPRFRVVTCVSAQHRGMLDQVLEIAGIVPDHDLDLMRPDQTLDALTAALLTEL GKVMDAVRPDWVVVQGDTATAMAGALAAYYRKLPVAHVEAGLRSHNIYHPWPEEVNRKIIGTIARLHFAPTEVSAAALRA ENVTEGVHVTGNTVIDALQWVSGRIAAEPALAAGLAEIEARFAGKRIIGVTSHRRENFGGGLENIAEAIRRIAQRDDVAL VFPVHPNPNVRKVMDDALAGLPNVAMIEPLDYPHFARLLSIAEIMLTDSGGVQEEAPALGKPVLVMRETTERPEGVTAGT ARLVGTDVDTIVTEIFTLLDDKAAYSAMARAHNPFGDGQSSRRIVELLANDG
Sequences:
>Translated_372_residues MVKTILVVFGTRPEAIKLFPVVHALRADPRFRVVTCVSAQHRGMLDQVLEIAGIVPDHDLDLMRPDQTLDALTAALLTEL GKVMDAVRPDWVVVQGDTATAMAGALAAYYRKLPVAHVEAGLRSHNIYHPWPEEVNRKIIGTIARLHFAPTEVSAAALRA ENVTEGVHVTGNTVIDALQWVSGRIAAEPALAAGLAEIEARFAGKRIIGVTSHRRENFGGGLENIAEAIRRIAQRDDVAL VFPVHPNPNVRKVMDDALAGLPNVAMIEPLDYPHFARLLSIAEIMLTDSGGVQEEAPALGKPVLVMRETTERPEGVTAGT ARLVGTDVDTIVTEIFTLLDDKAAYSAMARAHNPFGDGQSSRRIVELLANDG >Mature_372_residues MVKTILVVFGTRPEAIKLFPVVHALRADPRFRVVTCVSAQHRGMLDQVLEIAGIVPDHDLDLMRPDQTLDALTAALLTEL GKVMDAVRPDWVVVQGDTATAMAGALAAYYRKLPVAHVEAGLRSHNIYHPWPEEVNRKIIGTIARLHFAPTEVSAAALRA ENVTEGVHVTGNTVIDALQWVSGRIAAEPALAAGLAEIEARFAGKRIIGVTSHRRENFGGGLENIAEAIRRIAQRDDVAL VFPVHPNPNVRKVMDDALAGLPNVAMIEPLDYPHFARLLSIAEIMLTDSGGVQEEAPALGKPVLVMRETTERPEGVTAGT ARLVGTDVDTIVTEIFTLLDDKAAYSAMARAHNPFGDGQSSRRIVELLANDG
Specific function: Catalyzes the reversible epimerization at C-2 of UDP-N- acetylglucosamine (UDP-GlcNAc) and thereby provides bacteria with UDP-N-acetylmannosamine (UDP-ManNAc), the activated donor of ManNAc residues [H]
COG id: COG0381
COG function: function code M; UDP-N-acetylglucosamine 2-epimerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-N-acetylglucosamine 2-epimerase family [H]
Homologues:
Organism=Escherichia coli, GI48994967, Length=373, Percent_Identity=52.5469168900804, Blast_Score=373, Evalue=1e-104,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003331 [H]
Pfam domain/function: PF02350 Epimerase_2 [H]
EC number: =5.1.3.14 [H]
Molecular weight: Translated: 40196; Mature: 40196
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKTILVVFGTRPEAIKLFPVVHALRADPRFRVVTCVSAQHRGMLDQVLEIAGIVPDHDL CCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEECHHHCCHHHHHHHHHCCCCCCCC DLMRPDQTLDALTAALLTELGKVMDAVRPDWVVVQGDTATAMAGALAAYYRKLPVAHVEA CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCHHHHHH GLRSHNIYHPWPEEVNRKIIGTIARLHFAPTEVSAAALRAENVTEGVHVTGNTVIDALQW HHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEECCHHHHHHHHH VSGRIAAEPALAAGLAEIEARFAGKRIIGVTSHRRENFGGGLENIAEAIRRIAQRDDVAL HHCCHHCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHCCCCHHHHHHHHHHHHCCCCEEE VFPVHPNPNVRKVMDDALAGLPNVAMIEPLDYPHFARLLSIAEIMLTDSGGVQEEAPALG EEECCCCCCHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHEECCCCCCCCCCCCC KPVLVMRETTERPEGVTAGTARLVGTDVDTIVTEIFTLLDDKAAYSAMARAHNPFGDGQS CCEEEEECCCCCCCCCCCCCHHEECCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCH SRRIVELLANDG HHHHHHHHHCCC >Mature Secondary Structure MVKTILVVFGTRPEAIKLFPVVHALRADPRFRVVTCVSAQHRGMLDQVLEIAGIVPDHDL CCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEECHHHCCHHHHHHHHHCCCCCCCC DLMRPDQTLDALTAALLTELGKVMDAVRPDWVVVQGDTATAMAGALAAYYRKLPVAHVEA CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCHHHHHH GLRSHNIYHPWPEEVNRKIIGTIARLHFAPTEVSAAALRAENVTEGVHVTGNTVIDALQW HHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEECCHHHHHHHHH VSGRIAAEPALAAGLAEIEARFAGKRIIGVTSHRRENFGGGLENIAEAIRRIAQRDDVAL HHCCHHCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHCCCCHHHHHHHHHHHHCCCCEEE VFPVHPNPNVRKVMDDALAGLPNVAMIEPLDYPHFARLLSIAEIMLTDSGGVQEEAPALG EEECCCCCCHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHEECCCCCCCCCCCCC KPVLVMRETTERPEGVTAGTARLVGTDVDTIVTEIFTLLDDKAAYSAMARAHNPFGDGQS CCEEEEECCCCCCCCCCCCCHHEECCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCH SRRIVELLANDG HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]