Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

Click here to switch to the map view.

The map label for this gene is blh [H]

Identifier: 87201155

GI number: 87201155

Start: 3353813

End: 3354247

Strand: Direct

Name: blh [H]

Synonym: Saro_3143

Alternate gene names: 87201155

Gene position: 3353813-3354247 (Clockwise)

Preceding gene: 87201147

Following gene: 87201156

Centisome position: 94.17

GC content: 67.59

Gene sequence:

>435_bases
ATGTTTCGCAAGATAGACGAAAAGACGTACGCCAGCCCCCAGATCTCCATTCCGGAAGTCGCCTACGCCAAGGCACTTGG
CATCGGGCTCATCGTCAACAACCGTCCCGAGGGCGAATCGGACGACCAGACCCCGGGCGCCGAGATCGAGGCCGCCGCGC
GCGACGCGGGGATCGCCTATGTCGCGATACCGGTGACCCACGCAGGCTTCTCGATGGCGCAGGTAGAGGCGATGCAGAAG
GCGCTGGCCCAGGCGGGCGATGCCCCGGTCCTTGCCTATTGCCGCTCAGGCACCCGCTCCACCCTGCTCTGGGCGCTGGC
CCAGGCACAGGCCGGCGCAAACCCCGACGAGATCGCGGAAAAGGCTGCCGGCGCGGGCTATGACATTGCCCCCATCCGCG
CGACGGTGGACATGCTGGCCGCGCAGGCAGGCTGA

Upstream 100 bases:

>100_bases
TGGCTTTCATGCCGAAAGCACCCGATTTCGGGGCGGACTTGCCCCGCTCAACCGCATTGGGCACAAGCAAATTCCAGCGC
CCATATCAGGACTCGCCCTC

Downstream 100 bases:

>100_bases
TCCGGGCGGGAGGGGCACGGCGAGATGAAGGCATTGCTGGCACTCCCCGGCGCCGCCCTCGCCGCCCAGGCGGCAGGCTC
GCTTGTCGCCATCCTCGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MFRKIDEKTYASPQISIPEVAYAKALGIGLIVNNRPEGESDDQTPGAEIEAAARDAGIAYVAIPVTHAGFSMAQVEAMQK
ALAQAGDAPVLAYCRSGTRSTLLWALAQAQAGANPDEIAEKAAGAGYDIAPIRATVDMLAAQAG

Sequences:

>Translated_144_residues
MFRKIDEKTYASPQISIPEVAYAKALGIGLIVNNRPEGESDDQTPGAEIEAAARDAGIAYVAIPVTHAGFSMAQVEAMQK
ALAQAGDAPVLAYCRSGTRSTLLWALAQAQAGANPDEIAEKAAGAGYDIAPIRATVDMLAAQAG
>Mature_144_residues
MFRKIDEKTYASPQISIPEVAYAKALGIGLIVNNRPEGESDDQTPGAEIEAAARDAGIAYVAIPVTHAGFSMAQVEAMQK
ALAQAGDAPVLAYCRSGTRSTLLWALAQAQAGANPDEIAEKAAGAGYDIAPIRATVDMLAAQAG

Specific function: Unknown

COG id: COG3453

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-B beta-lactamase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005939
- InterPro:   IPR001279 [H]

Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 14888; Mature: 14888

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRKIDEKTYASPQISIPEVAYAKALGIGLIVNNRPEGESDDQTPGAEIEAAARDAGIAY
CCCCCCCCCCCCCCCCCCHHHHHHHHEEEEEECCCCCCCCCCCCCCCCEEHHHCCCCEEE
VAIPVTHAGFSMAQVEAMQKALAQAGDAPVLAYCRSGTRSTLLWALAQAQAGANPDEIAE
EEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHH
KAAGAGYDIAPIRATVDMLAAQAG
HHCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFRKIDEKTYASPQISIPEVAYAKALGIGLIVNNRPEGESDDQTPGAEIEAAARDAGIAY
CCCCCCCCCCCCCCCCCCHHHHHHHHEEEEEECCCCCCCCCCCCCCCCEEHHHCCCCEEE
VAIPVTHAGFSMAQVEAMQKALAQAGDAPVLAYCRSGTRSTLLWALAQAQAGANPDEIAE
EEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHH
KAAGAGYDIAPIRATVDMLAAQAG
HHCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]