| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is blh [H]
Identifier: 87201155
GI number: 87201155
Start: 3353813
End: 3354247
Strand: Direct
Name: blh [H]
Synonym: Saro_3143
Alternate gene names: 87201155
Gene position: 3353813-3354247 (Clockwise)
Preceding gene: 87201147
Following gene: 87201156
Centisome position: 94.17
GC content: 67.59
Gene sequence:
>435_bases ATGTTTCGCAAGATAGACGAAAAGACGTACGCCAGCCCCCAGATCTCCATTCCGGAAGTCGCCTACGCCAAGGCACTTGG CATCGGGCTCATCGTCAACAACCGTCCCGAGGGCGAATCGGACGACCAGACCCCGGGCGCCGAGATCGAGGCCGCCGCGC GCGACGCGGGGATCGCCTATGTCGCGATACCGGTGACCCACGCAGGCTTCTCGATGGCGCAGGTAGAGGCGATGCAGAAG GCGCTGGCCCAGGCGGGCGATGCCCCGGTCCTTGCCTATTGCCGCTCAGGCACCCGCTCCACCCTGCTCTGGGCGCTGGC CCAGGCACAGGCCGGCGCAAACCCCGACGAGATCGCGGAAAAGGCTGCCGGCGCGGGCTATGACATTGCCCCCATCCGCG CGACGGTGGACATGCTGGCCGCGCAGGCAGGCTGA
Upstream 100 bases:
>100_bases TGGCTTTCATGCCGAAAGCACCCGATTTCGGGGCGGACTTGCCCCGCTCAACCGCATTGGGCACAAGCAAATTCCAGCGC CCATATCAGGACTCGCCCTC
Downstream 100 bases:
>100_bases TCCGGGCGGGAGGGGCACGGCGAGATGAAGGCATTGCTGGCACTCCCCGGCGCCGCCCTCGCCGCCCAGGCGGCAGGCTC GCTTGTCGCCATCCTCGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MFRKIDEKTYASPQISIPEVAYAKALGIGLIVNNRPEGESDDQTPGAEIEAAARDAGIAYVAIPVTHAGFSMAQVEAMQK ALAQAGDAPVLAYCRSGTRSTLLWALAQAQAGANPDEIAEKAAGAGYDIAPIRATVDMLAAQAG
Sequences:
>Translated_144_residues MFRKIDEKTYASPQISIPEVAYAKALGIGLIVNNRPEGESDDQTPGAEIEAAARDAGIAYVAIPVTHAGFSMAQVEAMQK ALAQAGDAPVLAYCRSGTRSTLLWALAQAQAGANPDEIAEKAAGAGYDIAPIRATVDMLAAQAG >Mature_144_residues MFRKIDEKTYASPQISIPEVAYAKALGIGLIVNNRPEGESDDQTPGAEIEAAARDAGIAYVAIPVTHAGFSMAQVEAMQK ALAQAGDAPVLAYCRSGTRSTLLWALAQAQAGANPDEIAEKAAGAGYDIAPIRATVDMLAAQAG
Specific function: Unknown
COG id: COG3453
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005939 - InterPro: IPR001279 [H]
Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 14888; Mature: 14888
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRKIDEKTYASPQISIPEVAYAKALGIGLIVNNRPEGESDDQTPGAEIEAAARDAGIAY CCCCCCCCCCCCCCCCCCHHHHHHHHEEEEEECCCCCCCCCCCCCCCCEEHHHCCCCEEE VAIPVTHAGFSMAQVEAMQKALAQAGDAPVLAYCRSGTRSTLLWALAQAQAGANPDEIAE EEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHH KAAGAGYDIAPIRATVDMLAAQAG HHCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MFRKIDEKTYASPQISIPEVAYAKALGIGLIVNNRPEGESDDQTPGAEIEAAARDAGIAY CCCCCCCCCCCCCCCCCCHHHHHHHHEEEEEECCCCCCCCCCCCCCCCEEHHHCCCCEEE VAIPVTHAGFSMAQVEAMQKALAQAGDAPVLAYCRSGTRSTLLWALAQAQAGANPDEIAE EEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHH KAAGAGYDIAPIRATVDMLAAQAG HHCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]