| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87201132
Identifier: 87201132
GI number: 87201132
Start: 3333726
End: 3334034
Strand: Direct
Name: 87201132
Synonym: Saro_3120
Alternate gene names: NA
Gene position: 3333726-3334034 (Clockwise)
Preceding gene: 87201131
Following gene: 87201133
Centisome position: 93.6
GC content: 69.58
Gene sequence:
>309_bases ATGACGCGCGAGGACATGCTGGCGCGGCTGGTGGCGCAGGCCGGGAACGAAGGCTGCGAACTGGTGACGCTACGGGCGAT CGTGGAGGAAGCTTCCGACCTTGGCGCGGCGCGCGTGCTTGCCCGGATGGGCCTTGCCGACGACAATGCGCACGGCGACC TTGCCGAACTGCGCCAGCTGCTGGGCGCATGGCGCGATGCCAAGGCGAGCGCGTGGAAGGCAGCCGTGAACTGGGCCGTG CGCGCTGTTCTGGCGCTGCTGCTTTTCGCGATCGCGGTGCGCTTCGGGTCGGCGGAGCTGGTGCGATGA
Upstream 100 bases:
>100_bases AGGATCGCGAGAGACTGTGGTCGCAGGTGAGCGGCGCGGATTTCCTTTCCGCCGACGAAAAGCGGGCAATGCTTGGCCTT GACCGGAACGGGGTGGCGGC
Downstream 100 bases:
>100_bases CCGCCGCCTTCCCTCGGACGGGAGCACCGCTTCGGTTTGCCGGATATGCGGCGATCTTCAGCAAGCGGGACAGCGGTGGC GACACAATCCTGCCGGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MTREDMLARLVAQAGNEGCELVTLRAIVEEASDLGAARVLARMGLADDNAHGDLAELRQLLGAWRDAKASAWKAAVNWAV RAVLALLLFAIAVRFGSAELVR
Sequences:
>Translated_102_residues MTREDMLARLVAQAGNEGCELVTLRAIVEEASDLGAARVLARMGLADDNAHGDLAELRQLLGAWRDAKASAWKAAVNWAV RAVLALLLFAIAVRFGSAELVR >Mature_101_residues TREDMLARLVAQAGNEGCELVTLRAIVEEASDLGAARVLARMGLADDNAHGDLAELRQLLGAWRDAKASAWKAAVNWAVR AVLALLLFAIAVRFGSAELVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10943; Mature: 10812
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTREDMLARLVAQAGNEGCELVTLRAIVEEASDLGAARVLARMGLADDNAHGDLAELRQL CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH LGAWRDAKASAWKAAVNWAVRAVLALLLFAIAVRFGSAELVR HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC >Mature Secondary Structure TREDMLARLVAQAGNEGCELVTLRAIVEEASDLGAARVLARMGLADDNAHGDLAELRQL CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH LGAWRDAKASAWKAAVNWAVRAVLALLLFAIAVRFGSAELVR HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA