| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87201121
Identifier: 87201121
GI number: 87201121
Start: 3324517
End: 3325101
Strand: Reverse
Name: 87201121
Synonym: Saro_3109
Alternate gene names: NA
Gene position: 3325101-3324517 (Counterclockwise)
Preceding gene: 87201125
Following gene: 87201119
Centisome position: 93.36
GC content: 59.66
Gene sequence:
>585_bases ATGGCAGAGACCGGACCGCAGCCCGAACGCCAGTTGGCCGCACCTTCCATGCCCTCGCCCTCGGGCTATTCCAACCACGC CATCCACCTCGTCCGCACCTCGCAGCAGATCAACCTCACGCTCAGCCAGATGGCCGATGCCAAGGCCTCGATCCTGATGG GTGCTACGTTCCTGGTATTCACCATCGCGGTAGGCCAGGCGAAGAACGGGACGCTGCCGCTGTCGCTTGGCGTGCTGGCG ATCTTTGCTTTCATTTCAGCGATGTGCGCGGTCTTTGCGGTACTGCCCTCGGTCAGCGGGCCGGACAAGGCGAAGCTCAA TGACGGCAAGCCCAACAAGCTGTTCTTCGGCTATTTCACGCACATGGACGAAGACGTCTGGACAGATTCGATCCTTGCCG AACTCCATGCCGACGAGACTGTCTTCCGCACCATGCTGCACGACATTTACCAGAACGGCCAGGTCCTGCAGCGCAAGAAA TACCGTTATCTTTCATACGCCTACAAAAGCTTCATGGTCGGCCTGTGCCTGACGGTGGTCACCTTCGTCATGGAACACGC CAGCAGCGTGGCTGGCGCGATGTGA
Upstream 100 bases:
>100_bases ATGATTGCGGCGGAAAAGCGGCCTTTGCCGCGGCTTGTCAAGCGCGCCCGCCCTGTGTCATCCCGGCTCTGCCCGAAAAT CGACGACAGAGGGGGAGTTT
Downstream 100 bases:
>100_bases GCGGCCAGACGGTGGACCGCTCAGACCAGCGCGTTCACTGCCGCCATGAACGGCCCGATCGAAACCGGCTTGGCGAGGTA GCCTTCGGCGCCGGCGTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MAETGPQPERQLAAPSMPSPSGYSNHAIHLVRTSQQINLTLSQMADAKASILMGATFLVFTIAVGQAKNGTLPLSLGVLA IFAFISAMCAVFAVLPSVSGPDKAKLNDGKPNKLFFGYFTHMDEDVWTDSILAELHADETVFRTMLHDIYQNGQVLQRKK YRYLSYAYKSFMVGLCLTVVTFVMEHASSVAGAM
Sequences:
>Translated_194_residues MAETGPQPERQLAAPSMPSPSGYSNHAIHLVRTSQQINLTLSQMADAKASILMGATFLVFTIAVGQAKNGTLPLSLGVLA IFAFISAMCAVFAVLPSVSGPDKAKLNDGKPNKLFFGYFTHMDEDVWTDSILAELHADETVFRTMLHDIYQNGQVLQRKK YRYLSYAYKSFMVGLCLTVVTFVMEHASSVAGAM >Mature_193_residues AETGPQPERQLAAPSMPSPSGYSNHAIHLVRTSQQINLTLSQMADAKASILMGATFLVFTIAVGQAKNGTLPLSLGVLAI FAFISAMCAVFAVLPSVSGPDKAKLNDGKPNKLFFGYFTHMDEDVWTDSILAELHADETVFRTMLHDIYQNGQVLQRKKY RYLSYAYKSFMVGLCLTVVTFVMEHASSVAGAM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21159; Mature: 21028
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAETGPQPERQLAAPSMPSPSGYSNHAIHLVRTSQQINLTLSQMADAKASILMGATFLVF CCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH TIAVGQAKNGTLPLSLGVLAIFAFISAMCAVFAVLPSVSGPDKAKLNDGKPNKLFFGYFT HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEHHHH HMDEDVWTDSILAELHADETVFRTMLHDIYQNGQVLQRKKYRYLSYAYKSFMVGLCLTVV HCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TFVMEHASSVAGAM HHHHHHHHHHHCCC >Mature Secondary Structure AETGPQPERQLAAPSMPSPSGYSNHAIHLVRTSQQINLTLSQMADAKASILMGATFLVF CCCCCCCHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH TIAVGQAKNGTLPLSLGVLAIFAFISAMCAVFAVLPSVSGPDKAKLNDGKPNKLFFGYFT HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEHHHH HMDEDVWTDSILAELHADETVFRTMLHDIYQNGQVLQRKKYRYLSYAYKSFMVGLCLTVV HCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TFVMEHASSVAGAM HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA