| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87201077
Identifier: 87201077
GI number: 87201077
Start: 3283877
End: 3284602
Strand: Reverse
Name: 87201077
Synonym: Saro_3065
Alternate gene names: NA
Gene position: 3284602-3283877 (Counterclockwise)
Preceding gene: 87201080
Following gene: 87201076
Centisome position: 92.22
GC content: 67.36
Gene sequence:
>726_bases TTGCGCGTACTGGCATTGGCATCGCAAAAGGGTGGCTCGGGCAAGACCACATTGTCCGGTCATCTTGCCGTGCAGGCCCA GCGGGCCGGGGCCGGACCGGTCGTGCTGATCGACATCGACCCCCAGGGTTCGCTGTCCGACTGGTGGAACGAGCGCGAGG CCGAGTACCCCGCATTCGCCCAGACGACCGTTGCGCGACTCGCAGCCGATCTCGCGATCCTGCGCCAGCAGGGCTTCAAG CTGGCCGTCATCGATACGCCCCCGGCCATCACCATGGCGATCCAGTCGGTGATCTCGGTTGCCGAACTTGTCGTCGTGCC GACCCGCCCCAGCCCCCACGACCTCCGCGCCGTAGGCGCGACGGTCGATCTCTGCGATCGCGCGGGCAAGCCGCTGATCT TCGTGGTCAACGCCGCCACGCCGAAGGCGCGGATCACCTCCGAGGCAGCAGTCGCATTGTCGCAGCACGGTACCGTGGCG CCGGTCACGCTTCATCACCGCACCGATTTCGCGGCGTCGATGATCGATGGCCGCACCGTGATGGAGGTCGATCCGGGCAG CAAGTCGGCAGCCGAAGTCGCGGCGCTGTGGACCTACATTTCCGAGCGTCTCGAAAAGAACTTCCGCCGCACCGTGTTCG CCGTGCCGCAACAGGCAGCGGCCATTCCGATGCCCGGCACCCATCGCCCGGCTGGCGGCTTCGGCCGCCGCGTCGTAGGT TCCTGA
Upstream 100 bases:
>100_bases TTGTGGCGTCCTCGGCCCGAGGTGCGCCTGTTAACCAAAATTTCAGCCCATTCTGCGAATCCGTAGGGCACGAGCTTGCG AATTTCAGGGGGTTTGGGCT
Downstream 100 bases:
>100_bases AGGAGGACGGGTGATGAGCAGTGCAAAGCCTCTCGCATCGCTTTCTCCCAGCCTGCTGGCCCGCAAGGGCGGTGCGCGTC CGGCCATGCGTCCGCAGCTC
Product: cobyrinic acid a,c-diamide synthase
Products: NA
Alternate protein names: Cobyrinic Acid A C-Diamide Synthase; Partition Protein; ParA-Like Protein; ParA Family Protein; Plasmid Partition Protein ParA; ATPase ParA Type; ParA Family Partition Protein; Plasmid Partitioning Protein; Plasmid Partition Protein ParA-Like Protein; Plasmid Partitioning-Family Protein; Partitioning Protein ParA; Chromosome Partitioning ATPase; Plasmid Stability Protein ParA; ParA Plasmid Partitioning Protein; Plasmid Partitioning Protein F; ATPases Involved In Chromosome Partitioning; Plasmid Partitioning Protein-Like; ParA Family Plasmid Partitioning Protein; CobQ/CobB/MinD/ParA Domain-Containing Protein; Plasmid Partitioning Family Protein ParA/MinD; ATPases Involved In Chromosome Partitioning-Like Protein; Plasmid Partition Protein ParF; Plasmid Partition Protein; ParA Partitioning Protein; Partitioning Protein; ATPase Putative Partition Protein; Soj/ParA-Like ATPase Protein; Chromosome Partitioning; ATPase; ParA Protein; MinD/ParA Family ATPase; Partition Protein A; ParA Partitioning-Like Protein; Plasmid Partitioning-Like Protein; Plasmid Partitioning Family Protein ParA
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MRVLALASQKGGSGKTTLSGHLAVQAQRAGAGPVVLIDIDPQGSLSDWWNEREAEYPAFAQTTVARLAADLAILRQQGFK LAVIDTPPAITMAIQSVISVAELVVVPTRPSPHDLRAVGATVDLCDRAGKPLIFVVNAATPKARITSEAAVALSQHGTVA PVTLHHRTDFAASMIDGRTVMEVDPGSKSAAEVAALWTYISERLEKNFRRTVFAVPQQAAAIPMPGTHRPAGGFGRRVVG S
Sequences:
>Translated_241_residues MRVLALASQKGGSGKTTLSGHLAVQAQRAGAGPVVLIDIDPQGSLSDWWNEREAEYPAFAQTTVARLAADLAILRQQGFK LAVIDTPPAITMAIQSVISVAELVVVPTRPSPHDLRAVGATVDLCDRAGKPLIFVVNAATPKARITSEAAVALSQHGTVA PVTLHHRTDFAASMIDGRTVMEVDPGSKSAAEVAALWTYISERLEKNFRRTVFAVPQQAAAIPMPGTHRPAGGFGRRVVG S >Mature_241_residues MRVLALASQKGGSGKTTLSGHLAVQAQRAGAGPVVLIDIDPQGSLSDWWNEREAEYPAFAQTTVARLAADLAILRQQGFK LAVIDTPPAITMAIQSVISVAELVVVPTRPSPHDLRAVGATVDLCDRAGKPLIFVVNAATPKARITSEAAVALSQHGTVA PVTLHHRTDFAASMIDGRTVMEVDPGSKSAAEVAALWTYISERLEKNFRRTVFAVPQQAAAIPMPGTHRPAGGFGRRVVG S
Specific function: Unknown
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25427; Mature: 25427
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVLALASQKGGSGKTTLSGHLAVQAQRAGAGPVVLIDIDPQGSLSDWWNEREAEYPAFA CEEEEEECCCCCCCCEEEECEEEEEEECCCCCCEEEEEECCCCCHHHHHCCCCCCCCHHH QTTVARLAADLAILRQQGFKLAVIDTPPAITMAIQSVISVAELVVVPTRPSPHDLRAVGA HHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHEEEECCCCCCHHHHHHCC TVDLCDRAGKPLIFVVNAATPKARITSEAAVALSQHGTVAPVTLHHRTDFAASMIDGRTV HHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHCCCEE MEVDPGSKSAAEVAALWTYISERLEKNFRRTVFAVPQQAAAIPMPGTHRPAGGFGRRVVG EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCC S C >Mature Secondary Structure MRVLALASQKGGSGKTTLSGHLAVQAQRAGAGPVVLIDIDPQGSLSDWWNEREAEYPAFA CEEEEEECCCCCCCCEEEECEEEEEEECCCCCCEEEEEECCCCCHHHHHCCCCCCCCHHH QTTVARLAADLAILRQQGFKLAVIDTPPAITMAIQSVISVAELVVVPTRPSPHDLRAVGA HHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHEEEECCCCCCHHHHHHCC TVDLCDRAGKPLIFVVNAATPKARITSEAAVALSQHGTVAPVTLHHRTDFAASMIDGRTV HHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHCCCEE MEVDPGSKSAAEVAALWTYISERLEKNFRRTVFAVPQQAAAIPMPGTHRPAGGFGRRVVG EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCC S C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA