| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87201050
Identifier: 87201050
GI number: 87201050
Start: 3252814
End: 3253572
Strand: Direct
Name: 87201050
Synonym: Saro_3038
Alternate gene names: NA
Gene position: 3252814-3253572 (Clockwise)
Preceding gene: 87201047
Following gene: 87201052
Centisome position: 91.33
GC content: 69.04
Gene sequence:
>759_bases ATGCCGGCAGAGGATAGCGAGAACGACTCCCAAGCCCAAGCGCTTGCGCACAACTTCGTGCCACGCGGCGCAACCATGCT CGTGCCCGCGGCGATCCTGGCGGCGGCGCTCGTCGCCGGGGGGTGGTTCGTCGGGGACGGCCTGCGGCGCGCGAAGGTCG CGGACCGGGCGGTGACCGTGCGCGGCCTTGCCGAACGCGAGGTGACGGCGGACCTTGCCACCTGGACCCTCGCCTATTCC GCCACCGCGTCGGACCTGTCCAGCGCCCAGCAAAGCGTCGACCGCGACAGCCAGGCGATCCGCGCGTTCTTCGGCGAACT GGGCTTTCCCGCCGACGCGCTCCAGCCGACCGGCGTCAACGTCCAGACGATGACCAACAACGGCGTGACCACGTTCACCG TGCGCCAGCGCATGACATTGCGCACCACCGACATCGACCGCGCGCAGAAGGCCGTGCGGCGGCAATTCGACCTCGTCCGG CGCGGCGTGATGCTCGAGGAAGGGTCGGGCATGGCCTATACCTTCACCCGGCTCAACACGATCAAGCCCGAGATGGTCGC CGCCGCCACCAAGGACGCGCGCGCCGCCGCGGAACAGTTCGCACGCGACAGCGGCGCATCGGTCGAGGGCATCAAGGACG CAACGCAGGGCTATTTCGAGATCACCGCGCGCGACGGCGACGGCGGTGGATGGGGCGTATCCGACACGCCCTACAAGAAG GTGCGCGTGGTCACCACGATCGACTTCTACCTGCGCTGA
Upstream 100 bases:
>100_bases TGCAGGAACTTGGTCACGGGGAAGCTCGCTTCTCGTTCAAAAACGGTTCATCGATGAAATCGCACATTTCATCGCAGGCC ACGCCCGCAAGGAGATGACG
Downstream 100 bases:
>100_bases GGCCCGGCAGCGCCAAGGTCCGGCGGCGTTGAGGTCCGGCGGCGCCAGACCCTGACGCAGCAAGGCCCGCATCGCAAGCG CGACGCGGGCCCCACGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MPAEDSENDSQAQALAHNFVPRGATMLVPAAILAAALVAGGWFVGDGLRRAKVADRAVTVRGLAEREVTADLATWTLAYS ATASDLSSAQQSVDRDSQAIRAFFGELGFPADALQPTGVNVQTMTNNGVTTFTVRQRMTLRTTDIDRAQKAVRRQFDLVR RGVMLEEGSGMAYTFTRLNTIKPEMVAAATKDARAAAEQFARDSGASVEGIKDATQGYFEITARDGDGGGWGVSDTPYKK VRVVTTIDFYLR
Sequences:
>Translated_252_residues MPAEDSENDSQAQALAHNFVPRGATMLVPAAILAAALVAGGWFVGDGLRRAKVADRAVTVRGLAEREVTADLATWTLAYS ATASDLSSAQQSVDRDSQAIRAFFGELGFPADALQPTGVNVQTMTNNGVTTFTVRQRMTLRTTDIDRAQKAVRRQFDLVR RGVMLEEGSGMAYTFTRLNTIKPEMVAAATKDARAAAEQFARDSGASVEGIKDATQGYFEITARDGDGGGWGVSDTPYKK VRVVTTIDFYLR >Mature_251_residues PAEDSENDSQAQALAHNFVPRGATMLVPAAILAAALVAGGWFVGDGLRRAKVADRAVTVRGLAEREVTADLATWTLAYSA TASDLSSAQQSVDRDSQAIRAFFGELGFPADALQPTGVNVQTMTNNGVTTFTVRQRMTLRTTDIDRAQKAVRRQFDLVRR GVMLEEGSGMAYTFTRLNTIKPEMVAAATKDARAAAEQFARDSGASVEGIKDATQGYFEITARDGDGGGWGVSDTPYKKV RVVTTIDFYLR
Specific function: Unknown
COG id: COG2859
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27135; Mature: 27004
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAEDSENDSQAQALAHNFVPRGATMLVPAAILAAALVAGGWFVGDGLRRAKVADRAVTV CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH RGLAEREVTADLATWTLAYSATASDLSSAQQSVDRDSQAIRAFFGELGFPADALQPTGVN HHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCE VQTMTNNGVTTFTVRQRMTLRTTDIDRAQKAVRRQFDLVRRGVMLEEGSGMAYTFTRLNT EEEEECCCEEEEEEECCEEEEECCHHHHHHHHHHHHHHHHHCCEEECCCCCEEEEEECCC IKPEMVAAATKDARAAAEQFARDSGASVEGIKDATQGYFEITARDGDGGGWGVSDTPYKK CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCEEEEEEEECCCCCCCCCCCCCCE VRVVTTIDFYLR EEEEEEEEEEEC >Mature Secondary Structure PAEDSENDSQAQALAHNFVPRGATMLVPAAILAAALVAGGWFVGDGLRRAKVADRAVTV CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH RGLAEREVTADLATWTLAYSATASDLSSAQQSVDRDSQAIRAFFGELGFPADALQPTGVN HHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCE VQTMTNNGVTTFTVRQRMTLRTTDIDRAQKAVRRQFDLVRRGVMLEEGSGMAYTFTRLNT EEEEECCCEEEEEEECCEEEEECCHHHHHHHHHHHHHHHHHCCEEECCCCCEEEEEECCC IKPEMVAAATKDARAAAEQFARDSGASVEGIKDATQGYFEITARDGDGGGWGVSDTPYKK CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCEEEEEEEECCCCCCCCCCCCCCE VRVVTTIDFYLR EEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA