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The map label for this gene is clpX [H]

Identifier: 87201024

GI number: 87201024

Start: 3228726

End: 3228929

Strand: Reverse

Name: clpX [H]

Synonym: Saro_3012

Alternate gene names: 87201024

Gene position: 3228929-3228726 (Counterclockwise)

Preceding gene: 87201026

Following gene: 87201023

Centisome position: 90.66

GC content: 51.96

Gene sequence:

>204_bases
ATGATCGGACAGGACGCCAATCACACGATCTATTGCGACTTCTGCGGGAAGTCTCAGCACGAAGTTCGCAAGCTTATCGC
TGGTCCGTCTTCGTTCATCTGCAACGGATGCATCGAGCTTTGTGTCTATATTCTGGTGTCCGATAAGCACATCATGAATG
GCCATCGCCCGATGCTTCCCGGTGACATTGGGGTGAACGCCTAA

Upstream 100 bases:

>100_bases
AGTCCTGAGCCATGCTTATTCTGAAAATCCTTCTGGTCTGGTCACTGGTCGCACTGGTCCTGTCCGTGCTGGTCGGCAAG
TTCATCAAGGCGGGTGAAGC

Downstream 100 bases:

>100_bases
ATGTCGCTCAATCCTTTCCAGAACACGCAGGACCGCAGCGCCAATCGCTTCGGCATCCCCTGCGCGCTCTGTGTTTCCCT
TTCTCATGCTGGAGACTTCG

Product: zinc finger C4-type protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 67; Mature: 67

Protein sequence:

>67_residues
MIGQDANHTIYCDFCGKSQHEVRKLIAGPSSFICNGCIELCVYILVSDKHIMNGHRPMLPGDIGVNA

Sequences:

>Translated_67_residues
MIGQDANHTIYCDFCGKSQHEVRKLIAGPSSFICNGCIELCVYILVSDKHIMNGHRPMLPGDIGVNA
>Mature_67_residues
MIGQDANHTIYCDFCGKSQHEVRKLIAGPSSFICNGCIELCVYILVSDKHIMNGHRPMLPGDIGVNA

Specific function: ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP [H]

COG id: COG1219

COG function: function code O; ATP-dependent protease Clp, ATPase subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpX chaperone family [H]

Homologues:

Organism=Escherichia coli, GI1786642, Length=47, Percent_Identity=57.4468085106383, Blast_Score=65, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013093
- InterPro:   IPR019489
- InterPro:   IPR004487
- InterPro:   IPR010603 [H]

Pfam domain/function: PF07724 AAA_2; PF10431 ClpB_D2-small; PF06689 zf-C4_ClpX [H]

EC number: NA

Molecular weight: Translated: 7333; Mature: 7333

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: PS00028 ZINC_FINGER_C2H2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
11.9 %Cys+Met (Translated Protein)
7.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
11.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGQDANHTIYCDFCGKSQHEVRKLIAGPSSFICNGCIELCVYILVSDKHIMNGHRPMLP
CCCCCCCCEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCCCC
GDIGVNA
CCCCCCC
>Mature Secondary Structure
MIGQDANHTIYCDFCGKSQHEVRKLIAGPSSFICNGCIELCVYILVSDKHIMNGHRPMLP
CCCCCCCCEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCCCC
GDIGVNA
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA