| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is hipO [H]
Identifier: 87200944
GI number: 87200944
Start: 3147585
End: 3148733
Strand: Reverse
Name: hipO [H]
Synonym: Saro_2932
Alternate gene names: 87200944
Gene position: 3148733-3147585 (Counterclockwise)
Preceding gene: 87200945
Following gene: 87200937
Centisome position: 88.41
GC content: 68.49
Gene sequence:
>1149_bases ATGAGCGAAATCGCAGATCTCCTTCCGGACCTCGTGGCCCTGCGCCGCGACATCCATCAGAACCCCGAACTCGGCTTCTG CGAACACCGCACCGCCGCGCGCATCGCCGCAGAACTGCGGGCCAGCGGGATCGAGGTCCACGAAGGCATCGGCACCACCG GGCTCGTCGGCGTGCTCAAGGGCACGCGCGAGGGCACTCGCAGCCTCGGTCTGCGCGCCGACATGGATGCCCTGCCGATC CACGAGCAGACCAATCTTCCCTGGGCAAGCCGTACCCCCGGCACCTTCCACGGCTGCGGCCACGACGGCCACGTCGCGAT GCTGCTCGGCGCCGCCCGCGTGCTGGCTGCCGACCCCGACTTCGCGGGTACGGTCAACTTCATCTTCCAGCCCGCCGAGG AGGGGCAGGGCGGGGCGCGCGTGATGATCGAGGAAGGCCTGTTCGACCGCTTCCCCTGCGACCGCGTCTATGCGCTGCAC AACTGGCCGGGCCTGCCCGCCGGCACGATCAGCACCCGTCCCGGCGCGATCATGGGCGCGGCCGACAAGTTCCGCATCGC GCTTGTCGGCAAGGGCGGCCACGCCGCGATTCCGCAGGACAGCCCCGATGCGATCCTTGCCGCCGCCAGCCTTGTCCAGC AACTCAACACCATCGTCAGCCGTGCCGTGCCGCCCTATGCGGCGGCCGTCCTCTCGATCACCGAGATCCACGGTGGCCAC GCCCACAACGTCATCCCGGCGGAAGTCATGGTGGGGGGCACGGTCCGCACGTTCGACCCGGCGGTCCAGGATCGCATCGA GGAACGGATGCGCGCGATGCTGAAAGGCATCGAGGCTTCGTTCGAGGTCGAATGCGCGCTCGACTACGACCGTTACTATC CCGCCACGATCAACGATCCGCAGGCGGCAGCCGATGCGCTGGAAGTGGCCGCGACGGTGGCACGGGCGGAACTCGCGCCT GAACCCGCGCCGACCTCGGAAGACTTTTCCTTCATGCTCCAGCAGCGCCCCGGCGCCTACATCTGGCTGGGGCAGGGCAC GCAGGGCCACGCCGCGCCGCTCCACAATCCACACTACGATTTCAACGATGGCGTCATGGAAACGGGCATCCGTCTCCACG TTGCGCTTGCCCGGCACTGGCTGGGCTGA
Upstream 100 bases:
>100_bases CCTTCATCAAGCACCACTTCCCGATCCAGAACCTCTTCGGCCAGACCCACGGCTGAAGCCTCAAGGCCAAGGCAACCTTG CTGACGGACCCAAGGACAGC
Downstream 100 bases:
>100_bases AACGGGGACGGCCCGGATCGATCCGGGCCGCTGGCAGCTAGAAGCTAGAGCCTAGAAGCGCAGGGCCAGCCCGACGATGG CGCGATTGATACTGCCGCGG
Product: peptidase M20D, amidohydrolase
Products: NA
Alternate protein names: Benzoylglycine amidohydrolase; Hippuricase [H]
Number of amino acids: Translated: 382; Mature: 381
Protein sequence:
>382_residues MSEIADLLPDLVALRRDIHQNPELGFCEHRTAARIAAELRASGIEVHEGIGTTGLVGVLKGTREGTRSLGLRADMDALPI HEQTNLPWASRTPGTFHGCGHDGHVAMLLGAARVLAADPDFAGTVNFIFQPAEEGQGGARVMIEEGLFDRFPCDRVYALH NWPGLPAGTISTRPGAIMGAADKFRIALVGKGGHAAIPQDSPDAILAAASLVQQLNTIVSRAVPPYAAAVLSITEIHGGH AHNVIPAEVMVGGTVRTFDPAVQDRIEERMRAMLKGIEASFEVECALDYDRYYPATINDPQAAADALEVAATVARAELAP EPAPTSEDFSFMLQQRPGAYIWLGQGTQGHAAPLHNPHYDFNDGVMETGIRLHVALARHWLG
Sequences:
>Translated_382_residues MSEIADLLPDLVALRRDIHQNPELGFCEHRTAARIAAELRASGIEVHEGIGTTGLVGVLKGTREGTRSLGLRADMDALPI HEQTNLPWASRTPGTFHGCGHDGHVAMLLGAARVLAADPDFAGTVNFIFQPAEEGQGGARVMIEEGLFDRFPCDRVYALH NWPGLPAGTISTRPGAIMGAADKFRIALVGKGGHAAIPQDSPDAILAAASLVQQLNTIVSRAVPPYAAAVLSITEIHGGH AHNVIPAEVMVGGTVRTFDPAVQDRIEERMRAMLKGIEASFEVECALDYDRYYPATINDPQAAADALEVAATVARAELAP EPAPTSEDFSFMLQQRPGAYIWLGQGTQGHAAPLHNPHYDFNDGVMETGIRLHVALARHWLG >Mature_381_residues SEIADLLPDLVALRRDIHQNPELGFCEHRTAARIAAELRASGIEVHEGIGTTGLVGVLKGTREGTRSLGLRADMDALPIH EQTNLPWASRTPGTFHGCGHDGHVAMLLGAARVLAADPDFAGTVNFIFQPAEEGQGGARVMIEEGLFDRFPCDRVYALHN WPGLPAGTISTRPGAIMGAADKFRIALVGKGGHAAIPQDSPDAILAAASLVQQLNTIVSRAVPPYAAAVLSITEIHGGHA HNVIPAEVMVGGTVRTFDPAVQDRIEERMRAMLKGIEASFEVECALDYDRYYPATINDPQAAADALEVAATVARAELAPE PAPTSEDFSFMLQQRPGAYIWLGQGTQGHAAPLHNPHYDFNDGVMETGIRLHVALARHWLG
Specific function: Required But Not Essential For Aminobenzoyl-Glutamate Utilization. May Participate In Hydrolysis Of Aminobenzoyl- Glutamate To Aminobenzoate, Either Alone Or In Combination With Abgb. [C]
COG id: COG1473
COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M20 family [H]
Homologues:
Organism=Escherichia coli, GI87081880, Length=422, Percent_Identity=30.3317535545024, Blast_Score=110, Evalue=2e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017439 - InterPro: IPR010168 - InterPro: IPR002933 - InterPro: IPR011650 [H]
Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]
EC number: =3.5.1.32 [H]
Molecular weight: Translated: 40862; Mature: 40731
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEIADLLPDLVALRRDIHQNPELGFCEHRTAARIAAELRASGIEVHEGIGTTGLVGVLK CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHH GTREGTRSLGLRADMDALPIHEQTNLPWASRTPGTFHGCGHDGHVAMLLGAARVLAADPD CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEECCCC FAGTVNFIFQPAEEGQGGARVMIEEGLFDRFPCDRVYALHNWPGLPAGTISTRPGAIMGA CCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEC ADKFRIALVGKGGHAAIPQDSPDAILAAASLVQQLNTIVSRAVPPYAAAVLSITEIHGGH CCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC AHNVIPAEVMVGGTVRTFDPAVQDRIEERMRAMLKGIEASFEVECALDYDRYYPATINDP CCCCCCHHEEECCCEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCH QAAADALEVAATVARAELAPEPAPTSEDFSFMLQQRPGAYIWLGQGTQGHAAPLHNPHYD HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCC FNDGVMETGIRLHVALARHWLG CCCCHHHCCCEEEHHHHHHHCC >Mature Secondary Structure SEIADLLPDLVALRRDIHQNPELGFCEHRTAARIAAELRASGIEVHEGIGTTGLVGVLK CHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHH GTREGTRSLGLRADMDALPIHEQTNLPWASRTPGTFHGCGHDGHVAMLLGAARVLAADPD CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEECCCC FAGTVNFIFQPAEEGQGGARVMIEEGLFDRFPCDRVYALHNWPGLPAGTISTRPGAIMGA CCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEC ADKFRIALVGKGGHAAIPQDSPDAILAAASLVQQLNTIVSRAVPPYAAAVLSITEIHGGH CCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC AHNVIPAEVMVGGTVRTFDPAVQDRIEERMRAMLKGIEASFEVECALDYDRYYPATINDP CCCCCCHHEEECCCEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCH QAAADALEVAATVARAELAPEPAPTSEDFSFMLQQRPGAYIWLGQGTQGHAAPLHNPHYD HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCC FNDGVMETGIRLHVALARHWLG CCCCHHHCCCEEEHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7730270; 10688204 [H]