Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

Click here to switch to the map view.

The map label for this gene is 87200881

Identifier: 87200881

GI number: 87200881

Start: 3089774

End: 3090646

Strand: Reverse

Name: 87200881

Synonym: Saro_2868

Alternate gene names: NA

Gene position: 3090646-3089774 (Counterclockwise)

Preceding gene: 87200882

Following gene: 87200880

Centisome position: 86.78

GC content: 61.51

Gene sequence:

>873_bases
GTGCCCATCGACCTTTCGAAGATCAAGGCGATCGACGTCCACGTCCATGCCGAGGTCTCGTGCCATGATCCGGAAGACCC
GGTAATGGGCAAGTTCTTCGATGCGGCATCGGCCTACTTCAAGGCCCCGCGCGAGCGTCCCAAGATGCCCGAGATCATCG
AGATCTACCGCGAACAGCAGATCGCGTTCTGCATGTTCACCGTCGATTGCGAGAGCGGCATCGGTGCGAAGCGCGTCTCG
AACTACGAGATCGCCGAACTGGCCAACAAGAACGACGACATCTGCATCCCCTTCGCCTCGATCGATCCGCACAAGGGCAG
GATGGGCGCCCGCGAGGCGCGCGACCTTATCGAGAACCACGGGGTCAAGGGCTTCAAGTTCCACCACATCATGCAGAACA
TCGAGCCTGCCTCGCAGGTCGGCTACCCGATCTACGAGGTGATCAACGAATACAAGCTGCCCGCGATCTTCCACACCGGC
CATTCCGGGATGGGCACGGGAATGCGCGGCGGTGGCGGCGTCCGCCTCAAGTATGGCCAGCCCATGCTGGTCGATGATGT
CGCGGTCGATTTCCCCGACATGAAGATCATCCTCGCGCACCCCTCGTGGCCGTGGGTGGACGAAAGCCTGTCGATGGCGC
TGCACAAGGACAACGTGTTCATCGACCTGTCGGGCTGGTCGCCGAAGTACTTCCAGCCGCAGATCATCCAGTATGCCAAC
ACGCAGCTTCGCAAGAAGATGCTGTTCGGTTCGGACTTCCCGCTGATCCACCCCCAGAAGTGGCTCGATGCCGCCCGCCA
GGTCGGCTTCAAGGAGGAAGTTCTGCCCGGCATCATGAAGGACAACGCGGCCCGCGTCCTCGGCCTCGCCTGA

Upstream 100 bases:

>100_bases
CGCCTACCTCGAGACCAAGACCGTCATCATCCAGATGTAACGACAACCGGGGGAGGGGCCATGCTCCTCTCCCACCGTTC
AAAGAAATCGGAGAGAACCA

Downstream 100 bases:

>100_bases
GCGGGTCTGAAGGAGCAGGCCCGAAGGAGAAGCCGATGCCCGATCCCGACGATATCCGCGCCTGGCAGAGGCTCGATGCG
GAAACGACCACGTCGGGCCG

Product: amidohydrolase 2

Products: NA

Alternate protein names: Amidohydrolase Family Protein; Metal-Dependent Hydrolase; Metal-Dependent Hydrolase Of TIM-Barrel Fold; TIM-Barrel Fold Metal-Dependent Hydrolase; Antibiotic-Resistance Protein; Amidohydrolase Family

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MPIDLSKIKAIDVHVHAEVSCHDPEDPVMGKFFDAASAYFKAPRERPKMPEIIEIYREQQIAFCMFTVDCESGIGAKRVS
NYEIAELANKNDDICIPFASIDPHKGRMGAREARDLIENHGVKGFKFHHIMQNIEPASQVGYPIYEVINEYKLPAIFHTG
HSGMGTGMRGGGGVRLKYGQPMLVDDVAVDFPDMKIILAHPSWPWVDESLSMALHKDNVFIDLSGWSPKYFQPQIIQYAN
TQLRKKMLFGSDFPLIHPQKWLDAARQVGFKEEVLPGIMKDNAARVLGLA

Sequences:

>Translated_290_residues
MPIDLSKIKAIDVHVHAEVSCHDPEDPVMGKFFDAASAYFKAPRERPKMPEIIEIYREQQIAFCMFTVDCESGIGAKRVS
NYEIAELANKNDDICIPFASIDPHKGRMGAREARDLIENHGVKGFKFHHIMQNIEPASQVGYPIYEVINEYKLPAIFHTG
HSGMGTGMRGGGGVRLKYGQPMLVDDVAVDFPDMKIILAHPSWPWVDESLSMALHKDNVFIDLSGWSPKYFQPQIIQYAN
TQLRKKMLFGSDFPLIHPQKWLDAARQVGFKEEVLPGIMKDNAARVLGLA
>Mature_289_residues
PIDLSKIKAIDVHVHAEVSCHDPEDPVMGKFFDAASAYFKAPRERPKMPEIIEIYREQQIAFCMFTVDCESGIGAKRVSN
YEIAELANKNDDICIPFASIDPHKGRMGAREARDLIENHGVKGFKFHHIMQNIEPASQVGYPIYEVINEYKLPAIFHTGH
SGMGTGMRGGGGVRLKYGQPMLVDDVAVDFPDMKIILAHPSWPWVDESLSMALHKDNVFIDLSGWSPKYFQPQIIQYANT
QLRKKMLFGSDFPLIHPQKWLDAARQVGFKEEVLPGIMKDNAARVLGLA

Specific function: Unknown

COG id: COG2159

COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32638; Mature: 32507

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIDLSKIKAIDVHVHAEVSCHDPEDPVMGKFFDAASAYFKAPRERPKMPEIIEIYREQQ
CCCCCHHEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCC
IAFCMFTVDCESGIGAKRVSNYEIAELANKNDDICIPFASIDPHKGRMGAREARDLIENH
EEEEEEEEECCCCCCCHHCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHC
GVKGFKFHHIMQNIEPASQVGYPIYEVINEYKLPAIFHTGHSGMGTGMRGGGGVRLKYGQ
CCCCEEHHHHHHCCCHHHHHCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEEECCC
PMLVDDVAVDFPDMKIILAHPSWPWVDESLSMALHKDNVFIDLSGWSPKYFQPQIIQYAN
CEEEHHHCCCCCCEEEEEECCCCCCCCHHHHHEEECCCEEEEECCCCCCCCCHHHHHHHH
TQLRKKMLFGSDFPLIHPQKWLDAARQVGFKEEVLPGIMKDNAARVLGLA
HHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHCHHHHCCCCCEEECC
>Mature Secondary Structure 
PIDLSKIKAIDVHVHAEVSCHDPEDPVMGKFFDAASAYFKAPRERPKMPEIIEIYREQQ
CCCCHHEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCC
IAFCMFTVDCESGIGAKRVSNYEIAELANKNDDICIPFASIDPHKGRMGAREARDLIENH
EEEEEEEEECCCCCCCHHCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHC
GVKGFKFHHIMQNIEPASQVGYPIYEVINEYKLPAIFHTGHSGMGTGMRGGGGVRLKYGQ
CCCCEEHHHHHHCCCHHHHHCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEEECCC
PMLVDDVAVDFPDMKIILAHPSWPWVDESLSMALHKDNVFIDLSGWSPKYFQPQIIQYAN
CEEEHHHCCCCCCEEEEEECCCCCCCCHHHHHEEECCCEEEEECCCCCCCCCHHHHHHHH
TQLRKKMLFGSDFPLIHPQKWLDAARQVGFKEEVLPGIMKDNAARVLGLA
HHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHCHHHHCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA