Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200842

Identifier: 87200842

GI number: 87200842

Start: 3057306

End: 3057845

Strand: Reverse

Name: 87200842

Synonym: Saro_2829

Alternate gene names: NA

Gene position: 3057845-3057306 (Counterclockwise)

Preceding gene: 87200843

Following gene: 87200841

Centisome position: 85.86

GC content: 53.52

Gene sequence:

>540_bases
GTGCCTGTGAGGTTTATTCGCGCGGCTGTGTTTGCCGTTTCTCTTTCGTCGCTCGCGGTGGCAGCACCGGCAATCGCAAA
GAAAGAGACTCTCTCGGCTCTGCAGGTCCAGGAGATGCAGAGCCATGAAGTCGAAGCAACCAAGGAAATTACGTTTTCCT
CGGTAATGTCCGTATTGCAAGATTCAGGATACCGAATCAACTCGGCTGATAAGGACACAGGCCTGATCACAGCGACTGCT
TCGACTGCATCGAAGACCACGTGGTTGCCTTTTGTCGGCTTTGGCCGCTCGAAGAAGACGCCTGTCGTATCAGCTTATAT
TGAGCAGTACGGTCCGGCCATGACCAAGATTCGTTTGAATTTTGTAATGGTGAAGGCATCTGCGAACACTTACGGTTCCA
ATGAGGACGAGGAGCCCATTCTCGATCCGTCGGTCTATCGCGACACCTTTGAAAAGATCGATCAGGCGGTTTTCATCAGA
TCGGCTGCGCAAACGCCTGCGCCGGCGTCCGCATCGACCACTGCCACTGCGACGAACTGA

Upstream 100 bases:

>100_bases
CGAGCAAACATCACGCTCGATGACCCTGATCATTAAGTTCGACAAGAACAGGGTTGTTTCTGACTTCCGGAGCCGTAGTA
GCTCTTTCTAAACTTGGGGG

Downstream 100 bases:

>100_bases
AGATCATATTCTGCCAATTTGGTACAAGATACGCTCGACTGCACCAAGTTGTTAAGTTGATTTAGCCCCTTCTTCACCTT
GGAAGGAGGGGCTAATGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MPVRFIRAAVFAVSLSSLAVAAPAIAKKETLSALQVQEMQSHEVEATKEITFSSVMSVLQDSGYRINSADKDTGLITATA
STASKTTWLPFVGFGRSKKTPVVSAYIEQYGPAMTKIRLNFVMVKASANTYGSNEDEEPILDPSVYRDTFEKIDQAVFIR
SAAQTPAPASASTTATATN

Sequences:

>Translated_179_residues
MPVRFIRAAVFAVSLSSLAVAAPAIAKKETLSALQVQEMQSHEVEATKEITFSSVMSVLQDSGYRINSADKDTGLITATA
STASKTTWLPFVGFGRSKKTPVVSAYIEQYGPAMTKIRLNFVMVKASANTYGSNEDEEPILDPSVYRDTFEKIDQAVFIR
SAAQTPAPASASTTATATN
>Mature_178_residues
PVRFIRAAVFAVSLSSLAVAAPAIAKKETLSALQVQEMQSHEVEATKEITFSSVMSVLQDSGYRINSADKDTGLITATAS
TASKTTWLPFVGFGRSKKTPVVSAYIEQYGPAMTKIRLNFVMVKASANTYGSNEDEEPILDPSVYRDTFEKIDQAVFIRS
AAQTPAPASASTTATATN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19193; Mature: 19062

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVRFIRAAVFAVSLSSLAVAAPAIAKKETLSALQVQEMQSHEVEATKEITFSSVMSVLQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
DSGYRINSADKDTGLITATASTASKTTWLPFVGFGRSKKTPVVSAYIEQYGPAMTKIRLN
HCCCEECCCCCCCCEEEEECCCCCCCEECEEEECCCCCCCHHHHHHHHHHCCCEEEEEEE
FVMVKASANTYGSNEDEEPILDPSVYRDTFEKIDQAVFIRSAAQTPAPASASTTATATN
EEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PVRFIRAAVFAVSLSSLAVAAPAIAKKETLSALQVQEMQSHEVEATKEITFSSVMSVLQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
DSGYRINSADKDTGLITATASTASKTTWLPFVGFGRSKKTPVVSAYIEQYGPAMTKIRLN
HCCCEECCCCCCCCEEEEECCCCCCCEECEEEECCCCCCCHHHHHHHHHHCCCEEEEEEE
FVMVKASANTYGSNEDEEPILDPSVYRDTFEKIDQAVFIRSAAQTPAPASASTTATATN
EEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA