| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200827
Identifier: 87200827
GI number: 87200827
Start: 3037746
End: 3038771
Strand: Reverse
Name: 87200827
Synonym: Saro_2814
Alternate gene names: NA
Gene position: 3038771-3037746 (Counterclockwise)
Preceding gene: 87200828
Following gene: 87200826
Centisome position: 85.32
GC content: 64.23
Gene sequence:
>1026_bases ATGACCATGATCATCGACTGCCACGGTCACTACACCGTGCTGCCGAAGGCGCACGACGAGTGGCGCGAGAAGCAGAAGGC CGCATTCAAGGCCGGGACCGAGTGCCCGCCCTATCCCGAGATCTCAGACGACGAGATCCGCGAGACGATCGAGAGCAACC AGTTGCGCCTGCTCAAGGAGCGCGGCGCGGACATGACGATCTTTTCCCCCCGCGCGAGCGCGATGGCGCCGCATGTGGGC GACCAGTCGGTCGCGGTGAAGTGGGCGCAGGTCTGCAACGACCTGATCGCGCGCGTGGTCCGGCTCTACCCCGAGACCTT CGCGGGCGTGTGCATGCTGCCGCAGTCGCCGGAAGCGGACATGACCAGCTCCATCGCGGAGCTGGAGCGCTGCGTGAACG AACTGGGCTTCATCGGCTGCAACCTCAATCCCGATCCGGGCGGCGGGCACTTCAAGCATCCTCCCCTGACGGACGAATAC TGGTTCCCGTTCTACGAGAAGATGGTCGAGCTGGACGTTCCGGCGATGATCCACGTCTCGGGTTCGTGCAACCCGGCGAT GCACGCGACAGGCGGCTACTACATCGCGGCCGACACCATCGCGTTCATGCAGCTTCTGGAGGGCGACCTGTTCAGCAGGT TCCCGACCCTGCGCTTCATCATCCCGCATGGCGGCGGCGCGGTGCCCTATCACTGGGGACGCTATCGCGGGCTGGCCGAC ATGCTGAAGAAGCCCGGCCTCGACACGCACCTGATGAACAACGTGTTCTTCGACACCTGCGTCTATCACCAGCCCGGGAT CAACCTGCTGGCCGACGTGATCGAGAACAAGAACATCCTGTTCGGATCGGAAATGGTCGGCGCGGTGCGCGGGATCGATC CGACGACCGGGTTCTATTTCGACGACACCAAGCGCTATGTCGACGCGCTCGACATCAGCGATGCTGAACGCCACGCGATC TTCGAGGGCAACGCGCGCCGCGTGTTCCCGCGCCTCGACGCCAAGCTGAAGGAGAGGGGCCTGTGA
Upstream 100 bases:
>100_bases CGCTGGGCGTCGAGCCGGTGATGACCGGCGGGACGGTGAGGCGCCAGCGCGAGCAGGCGGGCAAGACCATAGAGTTCAAA CTTGAGAGGACTGAAGTCGC
Downstream 100 bases:
>100_bases CTGACAACAGCTCGACCGATAAGCCCAAGCCTGTGCAGAACATCCACGAGTACCTCGCCGAGTTCGAGGACATCCCCGGC ACGCGCATCTATACCGCTGC
Product: amidohydrolase 2
Products: NA
Alternate protein names: Aminocarboxymuconate-Semialdehyde Decarboxylase; 2-Amino-3-Carboxymuconate-6-Semialdehyde Decarboxylase; 2-Amino-3-Carboxylmuconate-6-Semialdehyde Decarboxylase; O-Pyrocatechuate Decarboxylase; Hydrolase; 5-Carboxyvanillate Decarboxylase; 2-Amino-3-Carboxymuconate-6- Semialdehyde Decarboxylase; FLDW Protein; Amidohydrolase Family Protein; LOW QUALITY PROTEIN 4-Oxalomesaconate Hydratase; 2 3-Dihydroxybenzoic Acid Decarboxylase; Amidohydrolase Family
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MTMIIDCHGHYTVLPKAHDEWREKQKAAFKAGTECPPYPEISDDEIRETIESNQLRLLKERGADMTIFSPRASAMAPHVG DQSVAVKWAQVCNDLIARVVRLYPETFAGVCMLPQSPEADMTSSIAELERCVNELGFIGCNLNPDPGGGHFKHPPLTDEY WFPFYEKMVELDVPAMIHVSGSCNPAMHATGGYYIAADTIAFMQLLEGDLFSRFPTLRFIIPHGGGAVPYHWGRYRGLAD MLKKPGLDTHLMNNVFFDTCVYHQPGINLLADVIENKNILFGSEMVGAVRGIDPTTGFYFDDTKRYVDALDISDAERHAI FEGNARRVFPRLDAKLKERGL
Sequences:
>Translated_341_residues MTMIIDCHGHYTVLPKAHDEWREKQKAAFKAGTECPPYPEISDDEIRETIESNQLRLLKERGADMTIFSPRASAMAPHVG DQSVAVKWAQVCNDLIARVVRLYPETFAGVCMLPQSPEADMTSSIAELERCVNELGFIGCNLNPDPGGGHFKHPPLTDEY WFPFYEKMVELDVPAMIHVSGSCNPAMHATGGYYIAADTIAFMQLLEGDLFSRFPTLRFIIPHGGGAVPYHWGRYRGLAD MLKKPGLDTHLMNNVFFDTCVYHQPGINLLADVIENKNILFGSEMVGAVRGIDPTTGFYFDDTKRYVDALDISDAERHAI FEGNARRVFPRLDAKLKERGL >Mature_340_residues TMIIDCHGHYTVLPKAHDEWREKQKAAFKAGTECPPYPEISDDEIRETIESNQLRLLKERGADMTIFSPRASAMAPHVGD QSVAVKWAQVCNDLIARVVRLYPETFAGVCMLPQSPEADMTSSIAELERCVNELGFIGCNLNPDPGGGHFKHPPLTDEYW FPFYEKMVELDVPAMIHVSGSCNPAMHATGGYYIAADTIAFMQLLEGDLFSRFPTLRFIIPHGGGAVPYHWGRYRGLADM LKKPGLDTHLMNNVFFDTCVYHQPGINLLADVIENKNILFGSEMVGAVRGIDPTTGFYFDDTKRYVDALDISDAERHAIF EGNARRVFPRLDAKLKERGL
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI109715856, Length=308, Percent_Identity=25.6493506493506, Blast_Score=82, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38201; Mature: 38070
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMIIDCHGHYTVLPKAHDEWREKQKAAFKAGTECPPYPEISDDEIRETIESNQLRLLKE CEEEEEECCCEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH RGADMTIFSPRASAMAPHVGDQSVAVKWAQVCNDLIARVVRLYPETFAGVCMLPQSPEAD CCCCEEEECCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCH MTSSIAELERCVNELGFIGCNLNPDPGGGHFKHPPLTDEYWFPFYEKMVELDVPAMIHVS HHHHHHHHHHHHHHHCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEC GSCNPAMHATGGYYIAADTIAFMQLLEGDLFSRFPTLRFIIPHGGGAVPYHWGRYRGLAD CCCCCCEECCCCEEEHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHH MLKKPGLDTHLMNNVFFDTCVYHQPGINLLADVIENKNILFGSEMVGAVRGIDPTTGFYF HHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEECHHHHHHHHCCCCCCCEEE DDTKRYVDALDISDAERHAIFEGNARRVFPRLDAKLKERGL CCHHHHHHHHCCCCCCCCEEEECCCCEECHHHHHHHHHCCC >Mature Secondary Structure TMIIDCHGHYTVLPKAHDEWREKQKAAFKAGTECPPYPEISDDEIRETIESNQLRLLKE EEEEEECCCEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH RGADMTIFSPRASAMAPHVGDQSVAVKWAQVCNDLIARVVRLYPETFAGVCMLPQSPEAD CCCCEEEECCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCH MTSSIAELERCVNELGFIGCNLNPDPGGGHFKHPPLTDEYWFPFYEKMVELDVPAMIHVS HHHHHHHHHHHHHHHCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEC GSCNPAMHATGGYYIAADTIAFMQLLEGDLFSRFPTLRFIIPHGGGAVPYHWGRYRGLAD CCCCCCEECCCCEEEHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHH MLKKPGLDTHLMNNVFFDTCVYHQPGINLLADVIENKNILFGSEMVGAVRGIDPTTGFYF HHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEECHHHHHHHHCCCCCCCEEE DDTKRYVDALDISDAERHAIFEGNARRVFPRLDAKLKERGL CCHHHHHHHHCCCCCCCCEEEECCCCEECHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA