| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is qorB [H]
Identifier: 87200821
GI number: 87200821
Start: 3032114
End: 3033031
Strand: Reverse
Name: qorB [H]
Synonym: Saro_2808
Alternate gene names: 87200821
Gene position: 3033031-3032114 (Counterclockwise)
Preceding gene: 87200822
Following gene: 87200820
Centisome position: 85.16
GC content: 67.86
Gene sequence:
>918_bases GTGAGCCGCATCGTCATTACCGGAGCCTCGGGCAACTATGGCCGGGGCGTGACGGACCGCCTGATCGCGCAGGGGCGCGC CGAAGACCTGATCCTCATCACGCGCAAGCCCGAGAAGCTGGCCGACCGGGCAGCACAGGGCTGCACCGTGCGCTATGGCG ATTTCGACAAGCCGGAAACGCTGGCGGAGGCGGTGCAGGGGGCGGAGCGGATGCTGCTGATCTCGGGCACGCGGGTCGGC GCGCGGGTGGTTCAGCACAAGGCGGCGATCGACGCGGCGGCAGCGGCGGGCGTGGCGCACCTGGTCTACACCAGCTTCAT CGGTATCGACGATCCGGCGAACCCCGCCGAAGTGCGGCACGATCATATCGAGACCGAAGCCCTGATGAAGGCCTCGGGTT GCGCGTGGACAATGCTGCGCGATGCGCACTATGCCGATGCGATGATCCTGATGGCAGGACCCGGCGTGATGCAGAGCGGC AAGTGGTTCTCCAATGCCGGAGAGGGCCGCGAGGCGATGGTCTGGCGCGACGACTGCATCGAAAGCGCGGTGGCGGTGCT GACCGGCGAGGGCCATCAGGGCCAGGTCTACAACATCACCGGGCCGGAATTGCAGACCTTCCGCGAGGTGGCGGCCATGA TGGCCGAGGTGACGGGGCGTCCGGTGGAGTACGTCTCGCTCGACGACGAGGGCCAGTACGCGATGTTCGACGCCATGGGC ATCCCGCGCCGCCCGGTGGACGACAGCGAGGTCAACGGCATCCCGTGGAACAGCGACGACATGGTCACCTTCGGCCGCGC GATCCGGGAGGGATTCCTCGAACTGTGCACCGACGACGTTGAGCGCCTGACCGGCCGCAAGGCGCGCTCGGTGCGGCAGA TGATCGAGGACAACGCGGAGTTGCTGCGGGGGGCGTGA
Upstream 100 bases:
>100_bases GCGCTGTGGCCAAGGTGCACATCCCGACGCGGCTGCGACCCCAGGTCCACGGCTGGTGGGTGCCCCAGGCGCAACTGGAC GCGCTTGAAGGCTCCGCAGC
Downstream 100 bases:
>100_bases GGGAGTTCGATGCTTCCTGGCTCGCCATTCCGGGCTTGATGCGGGGTGACGGAGTTGGGGACTGTCGGGTTTTGCAGGTT AACGGAGGCAAAATCACCGC
Product: NmrA-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MSRIVITGASGNYGRGVTDRLIAQGRAEDLILITRKPEKLADRAAQGCTVRYGDFDKPETLAEAVQGAERMLLISGTRVG ARVVQHKAAIDAAAAAGVAHLVYTSFIGIDDPANPAEVRHDHIETEALMKASGCAWTMLRDAHYADAMILMAGPGVMQSG KWFSNAGEGREAMVWRDDCIESAVAVLTGEGHQGQVYNITGPELQTFREVAAMMAEVTGRPVEYVSLDDEGQYAMFDAMG IPRRPVDDSEVNGIPWNSDDMVTFGRAIREGFLELCTDDVERLTGRKARSVRQMIEDNAELLRGA
Sequences:
>Translated_305_residues MSRIVITGASGNYGRGVTDRLIAQGRAEDLILITRKPEKLADRAAQGCTVRYGDFDKPETLAEAVQGAERMLLISGTRVG ARVVQHKAAIDAAAAAGVAHLVYTSFIGIDDPANPAEVRHDHIETEALMKASGCAWTMLRDAHYADAMILMAGPGVMQSG KWFSNAGEGREAMVWRDDCIESAVAVLTGEGHQGQVYNITGPELQTFREVAAMMAEVTGRPVEYVSLDDEGQYAMFDAMG IPRRPVDDSEVNGIPWNSDDMVTFGRAIREGFLELCTDDVERLTGRKARSVRQMIEDNAELLRGA >Mature_304_residues SRIVITGASGNYGRGVTDRLIAQGRAEDLILITRKPEKLADRAAQGCTVRYGDFDKPETLAEAVQGAERMLLISGTRVGA RVVQHKAAIDAAAAAGVAHLVYTSFIGIDDPANPAEVRHDHIETEALMKASGCAWTMLRDAHYADAMILMAGPGVMQSGK WFSNAGEGREAMVWRDDCIESAVAVLTGEGHQGQVYNITGPELQTFREVAAMMAEVTGRPVEYVSLDDEGQYAMFDAMGI PRRPVDDSEVNGIPWNSDDMVTFGRAIREGFLELCTDDVERLTGRKARSVRQMIEDNAELLRGA
Specific function: Quinone oxidoreductase that may play some additional role beyond quinone reduction. Potential redox sensor protein. Overexpression induces retardation of growth [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NmrA-type oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI1790656, Length=251, Percent_Identity=35.8565737051793, Blast_Score=145, Evalue=4e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR008030 [H]
Pfam domain/function: PF05368 NmrA [H]
EC number: =1.6.5.2 [H]
Molecular weight: Translated: 33148; Mature: 33017
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRIVITGASGNYGRGVTDRLIAQGRAEDLILITRKPEKLADRAAQGCTVRYGDFDKPET CCEEEEECCCCCCCCCHHHHHHHCCCCCCEEEEECCCHHHHHHHHCCCEEEECCCCCHHH LAEAVQGAERMLLISGTRVGARVVQHKAAIDAAAAAGVAHLVYTSFIGIDDPANPAEVRH HHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH DHIETEALMKASGCAWTMLRDAHYADAMILMAGPGVMQSGKWFSNAGEGREAMVWRDDCI HHHHHHHHHHHCCCEEEHHHHCHHHCEEEEEECCCCCCCCCCCCCCCCCCEEEEEHHHHH ESAVAVLTGEGHQGQVYNITGPELQTFREVAAMMAEVTGRPVEYVSLDDEGQYAMFDAMG HHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCC IPRRPVDDSEVNGIPWNSDDMVTFGRAIREGFLELCTDDVERLTGRKARSVRQMIEDNAE CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHH LLRGA HHCCC >Mature Secondary Structure SRIVITGASGNYGRGVTDRLIAQGRAEDLILITRKPEKLADRAAQGCTVRYGDFDKPET CEEEEECCCCCCCCCHHHHHHHCCCCCCEEEEECCCHHHHHHHHCCCEEEECCCCCHHH LAEAVQGAERMLLISGTRVGARVVQHKAAIDAAAAAGVAHLVYTSFIGIDDPANPAEVRH HHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH DHIETEALMKASGCAWTMLRDAHYADAMILMAGPGVMQSGKWFSNAGEGREAMVWRDDCI HHHHHHHHHHHCCCEEEHHHHCHHHCEEEEEECCCCCCCCCCCCCCCCCCEEEEEHHHHH ESAVAVLTGEGHQGQVYNITGPELQTFREVAAMMAEVTGRPVEYVSLDDEGQYAMFDAMG HHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCC IPRRPVDDSEVNGIPWNSDDMVTFGRAIREGFLELCTDDVERLTGRKARSVRQMIEDNAE CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHH LLRGA HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]