| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200815
Identifier: 87200815
GI number: 87200815
Start: 3025940
End: 3026341
Strand: Reverse
Name: 87200815
Synonym: Saro_2802
Alternate gene names: NA
Gene position: 3026341-3025940 (Counterclockwise)
Preceding gene: 87200816
Following gene: 87200814
Centisome position: 84.97
GC content: 62.94
Gene sequence:
>402_bases GTGCTGACGCGCGAAGCCTATGACCGCTACGTCGCGGCCTTCAACGCCAAGGACTATGACGCGGTAGCCGATTTCTATGT CGATCCGCCGCTGATGACGTTCTTCGGCGTCGAGATCCGCTCGCGCCAGGCGCTCAAGGATTTCTATGCCTTTCTCCACG ACCACGTGAAGGAAAGCGTGCGCGTGCTGAACTTCGCCGCATCCGAAACGCTAACCGCCATCGACGCGGTGATCCGGGTC GAGGGCGTCAAGGACCTTACGCGCGAGGCGCTCGACGCGCGGGGGCTGCACGGCTTCTTCCCGATTGCGGCGGGCGAGGT GCAGGAAATGCGGCAGTTCATCTTCTATACGATCGACAAGGGCCTGATCGAGCGCGTCGAGTGCGCTCTGGCGCAGGCGT GA
Upstream 100 bases:
>100_bases CCGGGGCTGCCGCCCGCCCACATTCCCGCTTGGCGCATACAATATCAAATGTTAGCATTTGGCCGACGAGCCGAATCCGG CCGCTTAGGGGAGAGAAGCC
Downstream 100 bases:
>100_bases GAGGAATTTCGAGCATGACACCCGAAGGCGTGAACGTAGCCCATCCCGACAAGCTCTACATCGCCGGCCGCTGGGTGCCG GCGCATTCGGGGCGGATGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MLTREAYDRYVAAFNAKDYDAVADFYVDPPLMTFFGVEIRSRQALKDFYAFLHDHVKESVRVLNFAASETLTAIDAVIRV EGVKDLTREALDARGLHGFFPIAAGEVQEMRQFIFYTIDKGLIERVECALAQA
Sequences:
>Translated_133_residues MLTREAYDRYVAAFNAKDYDAVADFYVDPPLMTFFGVEIRSRQALKDFYAFLHDHVKESVRVLNFAASETLTAIDAVIRV EGVKDLTREALDARGLHGFFPIAAGEVQEMRQFIFYTIDKGLIERVECALAQA >Mature_133_residues MLTREAYDRYVAAFNAKDYDAVADFYVDPPLMTFFGVEIRSRQALKDFYAFLHDHVKESVRVLNFAASETLTAIDAVIRV EGVKDLTREALDARGLHGFFPIAAGEVQEMRQFIFYTIDKGLIERVECALAQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15103; Mature: 15103
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTREAYDRYVAAFNAKDYDAVADFYVDPPLMTFFGVEIRSRQALKDFYAFLHDHVKESV CCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVLNFAASETLTAIDAVIRVEGVKDLTREALDARGLHGFFPIAAGEVQEMRQFIFYTIDK HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH GLIERVECALAQA HHHHHHHHHHHCC >Mature Secondary Structure MLTREAYDRYVAAFNAKDYDAVADFYVDPPLMTFFGVEIRSRQALKDFYAFLHDHVKESV CCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVLNFAASETLTAIDAVIRVEGVKDLTREALDARGLHGFFPIAAGEVQEMRQFIFYTIDK HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH GLIERVECALAQA HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA