Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200812

Identifier: 87200812

GI number: 87200812

Start: 3022879

End: 3023535

Strand: Direct

Name: 87200812

Synonym: Saro_2799

Alternate gene names: NA

Gene position: 3022879-3023535 (Clockwise)

Preceding gene: 87200804

Following gene: 87200817

Centisome position: 84.87

GC content: 66.06

Gene sequence:

>657_bases
ATGCCCGCAGTCATCTTCCCCGGTCCCGAAGGCCGCCTCGAAGGCCGCTTCCAGCCCGCCACGCGCCCCCGCGCACCCGT
CGCCATGATCCTGCATCCGCACCCGCAGGCAGGCGGCACGATGAACGACCGCATCACCCAGGCGCTCTACAAGACCTTCG
TGGCGCGCGGCTTCGCGACGCTGCGCTTCAACTTCCGCGGCGTCGGCCGCAGCCAGGGCTCGTTCGACAACGGCATCGGC
GAACTGTCCGATGCCGCCGCCGCGCTCGATTGGGTGCAGTCGATCCATCCCGAAGCCAGCACCACTTGGATCGCGGGCTA
TTCGTTCGGCGCGTTGATCGGCATGCAGCTTCTGATGCGCCGTCCGGAGATCCGCGGCTTCATCTCGGTCGCGCCGCCGG
CCAACATGTACGACTTCAGCTTCCTCGCGCCGTGCCCGGCCTCGGGCATCATCGTGCAGGGCGCCGCCGATACGGTCGTG
ACGCCGAACGCCGTGCAAAAGCTGGTCGACAAGCTGCGCACGCAAAAGCACATCACGATCCATCACGACGAGATTCCGCG
CGCGAACCACTTCTTCGAAAACGAACTCGACGAGATGATGCGCTCGGTCGACAACTACCTCGACATGCGCCTGTCGCCGG
ACTGCCCGATCAGGTGA

Upstream 100 bases:

>100_bases
ATTGCTTTCGCGGGGGTCGTTTCTATATAGCCGTCAACGCAATTCCCAGCCCCGGCAGTCCTTGCCGCTGCGGCCAGAAC
ACAGGAAAACCGGACAGGCA

Downstream 100 bases:

>100_bases
TCGGCACCGCGGCCGGAACTCGAAGCCCCCGCCCTCACCGGCGGGGGTTTTCCGTTCAGGCATCCGCTCACAGGACGAAG
TGATCTCCCGCCGCGCGAAC

Product: hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MPAVIFPGPEGRLEGRFQPATRPRAPVAMILHPHPQAGGTMNDRITQALYKTFVARGFATLRFNFRGVGRSQGSFDNGIG
ELSDAAAALDWVQSIHPEASTTWIAGYSFGALIGMQLLMRRPEIRGFISVAPPANMYDFSFLAPCPASGIIVQGAADTVV
TPNAVQKLVDKLRTQKHITIHHDEIPRANHFFENELDEMMRSVDNYLDMRLSPDCPIR

Sequences:

>Translated_218_residues
MPAVIFPGPEGRLEGRFQPATRPRAPVAMILHPHPQAGGTMNDRITQALYKTFVARGFATLRFNFRGVGRSQGSFDNGIG
ELSDAAAALDWVQSIHPEASTTWIAGYSFGALIGMQLLMRRPEIRGFISVAPPANMYDFSFLAPCPASGIIVQGAADTVV
TPNAVQKLVDKLRTQKHITIHHDEIPRANHFFENELDEMMRSVDNYLDMRLSPDCPIR
>Mature_217_residues
PAVIFPGPEGRLEGRFQPATRPRAPVAMILHPHPQAGGTMNDRITQALYKTFVARGFATLRFNFRGVGRSQGSFDNGIGE
LSDAAAALDWVQSIHPEASTTWIAGYSFGALIGMQLLMRRPEIRGFISVAPPANMYDFSFLAPCPASGIIVQGAADTVVT
PNAVQKLVDKLRTQKHITIHHDEIPRANHFFENELDEMMRSVDNYLDMRLSPDCPIR

Specific function: Unknown

COG id: COG2945

COG function: function code R; Predicted hydrolase of the alpha/beta superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000383 [H]

Pfam domain/function: PF02129 Peptidase_S15 [H]

EC number: NA

Molecular weight: Translated: 24088; Mature: 23957

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAVIFPGPEGRLEGRFQPATRPRAPVAMILHPHPQAGGTMNDRITQALYKTFVARGFAT
CCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEE
LRFNFRGVGRSQGSFDNGIGELSDAAAALDWVQSIHPEASTTWIAGYSFGALIGMQLLMR
EEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHH
RPEIRGFISVAPPANMYDFSFLAPCPASGIIVQGAADTVVTPNAVQKLVDKLRTQKHITI
CCCCCEEEEECCCCCCCCCEEECCCCCCCEEEECCCCCEECHHHHHHHHHHHHCCCCEEE
HHDEIPRANHFFENELDEMMRSVDNYLDMRLSPDCPIR
ECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
PAVIFPGPEGRLEGRFQPATRPRAPVAMILHPHPQAGGTMNDRITQALYKTFVARGFAT
CCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEE
LRFNFRGVGRSQGSFDNGIGELSDAAAALDWVQSIHPEASTTWIAGYSFGALIGMQLLMR
EEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHH
RPEIRGFISVAPPANMYDFSFLAPCPASGIIVQGAADTVVTPNAVQKLVDKLRTQKHITI
CCCCCEEEEECCCCCCCCCEEECCCCCCCEEEECCCCCEECHHHHHHHHHHHHCCCCEEE
HHDEIPRANHFFENELDEMMRSVDNYLDMRLSPDCPIR
ECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]