| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200741
Identifier: 87200741
GI number: 87200741
Start: 2957158
End: 2957568
Strand: Direct
Name: 87200741
Synonym: Saro_2728
Alternate gene names: NA
Gene position: 2957158-2957568 (Clockwise)
Preceding gene: 87200740
Following gene: 87200742
Centisome position: 83.03
GC content: 65.21
Gene sequence:
>411_bases ATGGCGATGAAGGGCGCAGACAAGCACCTGCGGAGGTTGCGCCGGTTGAGCGACGAAGCCGTCGACATGGCCGGTAAGGT CGTGTTCGTCGGCTCCGACATGGTCCGCGCCGAGGCCTTCCGCTCGATCTCGGCGGGGTCGGTGTCCGGAAAGAACCACG TGCCCAGCGCACCTGGCGAACCGCCCAACCGCGATACCGGGGTCTTGCAGGATAACCTTGTCAACGAGAAGACCGGTCCA CTCAGCGCCGAAGTGCGGTCCGAGGGCCCCTATGCCACCGAACTCGAACTCGGAACGTCGAAGATGGAGGCGCGCCCGTA TATGCGCCCCGCGCGCGACGCGACCGAGCCGAAGATTCAGCGCCTGTTCCGCGAGGAAATGGGCAAGCTGGTGAGGAGGT CGGGCAAATGA
Upstream 100 bases:
>100_bases TCGTCGCCACCGGCGAGCATGCCGGCACATGGTCGCTGGAATCCATCACGGGCGATCCCGCTGGCATCGGTTGGGAATGC CGCGCCCGAAAGATCGCCTG
Downstream 100 bases:
>100_bases AGACAATCAAGCTCGCGAAGGCTTGGACCTATCGCACCCCGGAAGTGACGATCGACTATCTGGCCGGGGAACATCAGGTC CGGGACGAAATCGCGGCACA
Product: Phage protein, HK97, gp10
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MAMKGADKHLRRLRRLSDEAVDMAGKVVFVGSDMVRAEAFRSISAGSVSGKNHVPSAPGEPPNRDTGVLQDNLVNEKTGP LSAEVRSEGPYATELELGTSKMEARPYMRPARDATEPKIQRLFREEMGKLVRRSGK
Sequences:
>Translated_136_residues MAMKGADKHLRRLRRLSDEAVDMAGKVVFVGSDMVRAEAFRSISAGSVSGKNHVPSAPGEPPNRDTGVLQDNLVNEKTGP LSAEVRSEGPYATELELGTSKMEARPYMRPARDATEPKIQRLFREEMGKLVRRSGK >Mature_135_residues AMKGADKHLRRLRRLSDEAVDMAGKVVFVGSDMVRAEAFRSISAGSVSGKNHVPSAPGEPPNRDTGVLQDNLVNEKTGPL SAEVRSEGPYATELELGTSKMEARPYMRPARDATEPKIQRLFREEMGKLVRRSGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14937; Mature: 14806
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMKGADKHLRRLRRLSDEAVDMAGKVVFVGSDMVRAEAFRSISAGSVSGKNHVPSAPGE CCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCC PPNRDTGVLQDNLVNEKTGPLSAEVRSEGPYATELELGTSKMEARPYMRPARDATEPKIQ CCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHCCCCCCCCCCCCCHHHH RLFREEMGKLVRRSGK HHHHHHHHHHHHHCCC >Mature Secondary Structure AMKGADKHLRRLRRLSDEAVDMAGKVVFVGSDMVRAEAFRSISAGSVSGKNHVPSAPGE CCCCHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCC PPNRDTGVLQDNLVNEKTGPLSAEVRSEGPYATELELGTSKMEARPYMRPARDATEPKIQ CCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHCCCCCCCCCCCCCHHHH RLFREEMGKLVRRSGK HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA