| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200739
Identifier: 87200739
GI number: 87200739
Start: 2956413
End: 2956787
Strand: Direct
Name: 87200739
Synonym: Saro_2726
Alternate gene names: NA
Gene position: 2956413-2956787 (Clockwise)
Preceding gene: 87200738
Following gene: 87200740
Centisome position: 83.01
GC content: 69.33
Gene sequence:
>375_bases ATGGCCTACTCCGCCCCCACCGCAGCCACACTCAAGGCCCGCTACCCAGCCTTCACCGCCGTCGCCGACGCCACCATCGA CTACTGGCTGGCCGAAGCGGCGGAGGATTGCGCGGGTTGGCCCGACAGCCTCAGGGCTCGCGGTGAAATGGCCCTCGCCG CGCATCGCATGGCAGAGTTGGGCATCGTCGCCGGCACTGTCCCCGCCGGCGTCACCTCGTTCAAGTCCGGCACCTTCTCG GCCACGGTTTCGGACGGAGTTGCATCGCGCACCGGCTACGACGCCACACTCTACGGTCGAGAGTTCCGCCAGCTGGCCCG CAGCGTATTCGGCGGACCGCGCCTTGCATGGCAGCCGAGCGCCGAGCCGTGCTGA
Upstream 100 bases:
>100_bases TCGCAACAGGGGTGGCGAAGGGGCTGGCGGCAACGCTGGCCCCTTTTGCTTTGCCCTGACGGCGGTAACCTCATGTCGAC GCCTGCGCCATGCCCACCCC
Downstream 100 bases:
>100_bases ACCAGATCTTCGCCAGCCTTGCCACAGGCTTTGCCGCGCAATTCGGCGCGCCGTTTCAGGACGTGTCGGCGACGTGGCCG GGCACCGCGGTCTATGACGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MAYSAPTAATLKARYPAFTAVADATIDYWLAEAAEDCAGWPDSLRARGEMALAAHRMAELGIVAGTVPAGVTSFKSGTFS ATVSDGVASRTGYDATLYGREFRQLARSVFGGPRLAWQPSAEPC
Sequences:
>Translated_124_residues MAYSAPTAATLKARYPAFTAVADATIDYWLAEAAEDCAGWPDSLRARGEMALAAHRMAELGIVAGTVPAGVTSFKSGTFS ATVSDGVASRTGYDATLYGREFRQLARSVFGGPRLAWQPSAEPC >Mature_123_residues AYSAPTAATLKARYPAFTAVADATIDYWLAEAAEDCAGWPDSLRARGEMALAAHRMAELGIVAGTVPAGVTSFKSGTFSA TVSDGVASRTGYDATLYGREFRQLARSVFGGPRLAWQPSAEPC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13025; Mature: 12893
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYSAPTAATLKARYPAFTAVADATIDYWLAEAAEDCAGWPDSLRARGEMALAAHRMAEL CCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHH GIVAGTVPAGVTSFKSGTFSATVSDGVASRTGYDATLYGREFRQLARSVFGGPRLAWQPS HHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCC AEPC CCCC >Mature Secondary Structure AYSAPTAATLKARYPAFTAVADATIDYWLAEAAEDCAGWPDSLRARGEMALAAHRMAEL CCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHH GIVAGTVPAGVTSFKSGTFSATVSDGVASRTGYDATLYGREFRQLARSVFGGPRLAWQPS HHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCC AEPC CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA