| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
Click here to switch to the map view.
The map label for this gene is purA
Identifier: 87200696
GI number: 87200696
Start: 2922561
End: 2923850
Strand: Direct
Name: purA
Synonym: Saro_2683
Alternate gene names: 87200696
Gene position: 2922561-2923850 (Clockwise)
Preceding gene: 87200694
Following gene: 87200697
Centisome position: 82.06
GC content: 67.6
Gene sequence:
>1290_bases ATGGCCAATGTAACCGTGATTGGTGCCCAGTGGGGCGATGAAGGCAAGGGCAAGATCGTGGACTGGCTCGCCAGCCGCGC CGATGCCGTCGTCCGTTTCCAGGGCGGCCACAATGCCGGCCACACCCTCGTCGTGGGCGAACAGGTCTACAAGCTCTCGC TGCTGCCTTCGGGCATCGTCACCGGCACGCTGTCGATCATCGGCAACGGCGTCGTGCTCGATCCCTGGGCCTTGAAGGCA GAGATCGAGAAGCTGACCGGCCAGGGCGTCGAGATCAATGCCGAGAACTTCGCCATTGCCGACAATTGCCCGCTGATTCT CCCGCTCCACCGCGATCTCGACGGCCTGCGCGAACAGGCCGCCGGCGCCGGCAAGATCGGCACCACCGGTCGGGGCATCG GCCCGGCCTATGAAGACAAGGTCGGCCGCCGCGCGATCCGCGTCTGCGACCTCGCTCATCTCGATGCGCTCGATGCGCAG CTCGACCGCCTTTGCGCCCACCACGATGCACTGCGCGCCGGCTTCGGCCAGCCGCCGGTGGACCGCGCCGCCCTGATCGA GGAACTGCGTGAAATCGCGCCATACGTGCTGCAGTTCGCCCAGCCCGTGTGGAAGCGCCTCAATACCGTCCGCAAGGCCG GCGCGCGCATCCTGTTCGAAGGCGCCCAGGGCGTGCTGCTCGACGTCGATCACGGCACCTATCCGTTCGTCACCTCGTCG AACACCGTTTCCGGCACCGCCGCTTCGGGTTCGGGCCTCGGCCCCGCGCAGACCGGCTTCGTGCTGGGCATCGTCAAGGC CTACACCACCCGCGTCGGCTCCGGTCCCTTCCCGACCGAGCTCGAGGACGAGACCGGCCAGCGCCTTGGCGAACGCGGCC ACGAATTCGGCACGGTCACGGGCCGCAAGCGCCGCTGCGGCTGGTTCGACGCCGTGCTGGTGCGCCAGTCCTGCGCGATC TCCGGCGTGACCGGCATCGCGCTGACCAAGCTCGACGTGCTCGACGGCTTTGAAAAGGTGAAGATCTGCACCGGCTACCG CCTGCGCGGCAAGGTGCTGGACTACTTCCCCAGCCACGCGGCCGACCAGGCCGAAGTCGAGCCGATCTACGAGGAAATGG ACGGCTGGAGCGGCACCACCGCCGGTGCCCGCTCATGGGCCGATCTGCCTGCCCAGGCGATCAAGTACATCCAGCGCGTG CAGGAACTGATCGAAACGCCGGTCGCGCTGGTCTCCACCAGCCCGGAACGCGAGGACACGATCCTCGTCCGCGATCCCTT CGTCGACTGA
Upstream 100 bases:
>100_bases TCGAAAAACCGGGGCCGTGCCCCGCCCATCCATCCCGTTTCGCCGAGTCCTGTCGAAGGGCGTCTTGAGGATCCACCTGG CAGGGTGGAGGAGTGTATTC
Downstream 100 bases:
>100_bases TCGTCCCGCGCCCTCTCCCTTCGGGGAGAGGGTTGGTTAGCAACGCTGGTTGAGCTAGCCTCGCCCGGCCATGGCCGACC TGCGCATACTGCTGCTGCTG
Product: adenylosuccinate synthetase
Products: NA
Alternate protein names: AMPSase; AdSS; IMP--aspartate ligase
Number of amino acids: Translated: 429; Mature: 428
Protein sequence:
>429_residues MANVTVIGAQWGDEGKGKIVDWLASRADAVVRFQGGHNAGHTLVVGEQVYKLSLLPSGIVTGTLSIIGNGVVLDPWALKA EIEKLTGQGVEINAENFAIADNCPLILPLHRDLDGLREQAAGAGKIGTTGRGIGPAYEDKVGRRAIRVCDLAHLDALDAQ LDRLCAHHDALRAGFGQPPVDRAALIEELREIAPYVLQFAQPVWKRLNTVRKAGARILFEGAQGVLLDVDHGTYPFVTSS NTVSGTAASGSGLGPAQTGFVLGIVKAYTTRVGSGPFPTELEDETGQRLGERGHEFGTVTGRKRRCGWFDAVLVRQSCAI SGVTGIALTKLDVLDGFEKVKICTGYRLRGKVLDYFPSHAADQAEVEPIYEEMDGWSGTTAGARSWADLPAQAIKYIQRV QELIETPVALVSTSPEREDTILVRDPFVD
Sequences:
>Translated_429_residues MANVTVIGAQWGDEGKGKIVDWLASRADAVVRFQGGHNAGHTLVVGEQVYKLSLLPSGIVTGTLSIIGNGVVLDPWALKA EIEKLTGQGVEINAENFAIADNCPLILPLHRDLDGLREQAAGAGKIGTTGRGIGPAYEDKVGRRAIRVCDLAHLDALDAQ LDRLCAHHDALRAGFGQPPVDRAALIEELREIAPYVLQFAQPVWKRLNTVRKAGARILFEGAQGVLLDVDHGTYPFVTSS NTVSGTAASGSGLGPAQTGFVLGIVKAYTTRVGSGPFPTELEDETGQRLGERGHEFGTVTGRKRRCGWFDAVLVRQSCAI SGVTGIALTKLDVLDGFEKVKICTGYRLRGKVLDYFPSHAADQAEVEPIYEEMDGWSGTTAGARSWADLPAQAIKYIQRV QELIETPVALVSTSPEREDTILVRDPFVD >Mature_428_residues ANVTVIGAQWGDEGKGKIVDWLASRADAVVRFQGGHNAGHTLVVGEQVYKLSLLPSGIVTGTLSIIGNGVVLDPWALKAE IEKLTGQGVEINAENFAIADNCPLILPLHRDLDGLREQAAGAGKIGTTGRGIGPAYEDKVGRRAIRVCDLAHLDALDAQL DRLCAHHDALRAGFGQPPVDRAALIEELREIAPYVLQFAQPVWKRLNTVRKAGARILFEGAQGVLLDVDHGTYPFVTSSN TVSGTAASGSGLGPAQTGFVLGIVKAYTTRVGSGPFPTELEDETGQRLGERGHEFGTVTGRKRRCGWFDAVLVRQSCAIS GVTGIALTKLDVLDGFEKVKICTGYRLRGKVLDYFPSHAADQAEVEPIYEEMDGWSGTTAGARSWADLPAQAIKYIQRVQ ELIETPVALVSTSPEREDTILVRDPFVD
Specific function: Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP
COG id: COG0104
COG function: function code F; Adenylosuccinate synthase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylosuccinate synthetase family
Homologues:
Organism=Homo sapiens, GI22748717, Length=422, Percent_Identity=43.6018957345972, Blast_Score=331, Evalue=8e-91, Organism=Homo sapiens, GI34577063, Length=427, Percent_Identity=41.2177985948478, Blast_Score=313, Evalue=1e-85, Organism=Homo sapiens, GI40316944, Length=394, Percent_Identity=41.6243654822335, Blast_Score=290, Evalue=3e-78, Organism=Escherichia coli, GI1790620, Length=428, Percent_Identity=50.4672897196262, Blast_Score=423, Evalue=1e-119, Organism=Caenorhabditis elegans, GI25146553, Length=430, Percent_Identity=41.6279069767442, Blast_Score=325, Evalue=2e-89, Organism=Caenorhabditis elegans, GI25146555, Length=430, Percent_Identity=41.6279069767442, Blast_Score=325, Evalue=3e-89, Organism=Saccharomyces cerevisiae, GI6324109, Length=432, Percent_Identity=39.3518518518519, Blast_Score=301, Evalue=1e-82, Organism=Drosophila melanogaster, GI21356033, Length=422, Percent_Identity=40.7582938388626, Blast_Score=308, Evalue=6e-84,
Paralogues:
None
Copy number: 940 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): PURA_NOVAD (Q2G4V4)
Other databases:
- EMBL: CP000248 - RefSeq: YP_497953.1 - ProteinModelPortal: Q2G4V4 - SMR: Q2G4V4 - STRING: Q2G4V4 - GeneID: 3918457 - GenomeReviews: CP000248_GR - KEGG: nar:Saro_2683 - NMPDR: fig|48935.1.peg.761 - eggNOG: COG0104 - HOGENOM: HBG658237 - OMA: DYVVRYQ - PhylomeDB: Q2G4V4 - ProtClustDB: PRK01117 - BioCyc: NARO279238:SARO_2683-MONOMER - GO: GO:0005737 - HAMAP: MF_00011 - InterPro: IPR018220 - InterPro: IPR001114 - PANTHER: PTHR11846 - SMART: SM00788 - TIGRFAMs: TIGR00184
Pfam domain/function: PF00709 Adenylsucc_synt
EC number: =6.3.4.4
Molecular weight: Translated: 46028; Mature: 45897
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: PS01266 ADENYLOSUCCIN_SYN_1; PS00513 ADENYLOSUCCIN_SYN_2
Important sites: ACT_SITE 13-13 ACT_SITE 41-41 BINDING 129-129 BINDING 143-143 BINDING 223-223 BINDING 238-238 BINDING 302-302 BINDING 304-304
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANVTVIGAQWGDEGKGKIVDWLASRADAVVRFQGGHNAGHTLVVGEQVYKLSLLPSGIV CCCEEEEECCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCEEEECCCEEEEECCCCCHH TGTLSIIGNGVVLDPWALKAEIEKLTGQGVEINAENFAIADNCPLILPLHRDLDGLREQA HHHHHHHCCCEEECCHHHHHHHHHHCCCCEEECCCCEEEECCCCEEEECCCCHHHHHHHH AGAGKIGTTGRGIGPAYEDKVGRRAIRVCDLAHLDALDAQLDRLCAHHDALRAGFGQPPV CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DRAALIEELREIAPYVLQFAQPVWKRLNTVRKAGARILFEGAQGVLLDVDHGTYPFVTSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCCCCEEECC NTVSGTAASGSGLGPAQTGFVLGIVKAYTTRVGSGPFPTELEDETGQRLGERGHEFGTVT CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCC GRKRRCGWFDAVLVRQSCAISGVTGIALTKLDVLDGFEKVKICTGYRLRGKVLDYFPSHA CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHEEEECCCEECCHHHHHCCCCC ADQAEVEPIYEEMDGWSGTTAGARSWADLPAQAIKYIQRVQELIETPVALVSTSPEREDT CCCCHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCE ILVRDPFVD EEEECCCCC >Mature Secondary Structure ANVTVIGAQWGDEGKGKIVDWLASRADAVVRFQGGHNAGHTLVVGEQVYKLSLLPSGIV CCEEEEECCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCEEEECCCEEEEECCCCCHH TGTLSIIGNGVVLDPWALKAEIEKLTGQGVEINAENFAIADNCPLILPLHRDLDGLREQA HHHHHHHCCCEEECCHHHHHHHHHHCCCCEEECCCCEEEECCCCEEEECCCCHHHHHHHH AGAGKIGTTGRGIGPAYEDKVGRRAIRVCDLAHLDALDAQLDRLCAHHDALRAGFGQPPV CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DRAALIEELREIAPYVLQFAQPVWKRLNTVRKAGARILFEGAQGVLLDVDHGTYPFVTSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCCCCEEECC NTVSGTAASGSGLGPAQTGFVLGIVKAYTTRVGSGPFPTELEDETGQRLGERGHEFGTVT CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCC GRKRRCGWFDAVLVRQSCAISGVTGIALTKLDVLDGFEKVKICTGYRLRGKVLDYFPSHA CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHEEEECCCEECCHHHHHCCCCC ADQAEVEPIYEEMDGWSGTTAGARSWADLPAQAIKYIQRVQELIETPVALVSTSPEREDT CCCCHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCE ILVRDPFVD EEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA