| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is resA [H]
Identifier: 87200691
GI number: 87200691
Start: 2916374
End: 2916925
Strand: Direct
Name: resA [H]
Synonym: Saro_2678
Alternate gene names: 87200691
Gene position: 2916374-2916925 (Clockwise)
Preceding gene: 87200686
Following gene: 87200692
Centisome position: 81.88
GC content: 64.13
Gene sequence:
>552_bases ATGGCGGCGCTCGCCGTCGCGGGGTGCGATAGGCAAGCCGCGCCCGACTCGCAACCGCAGAGCAGCACCGCGCCTGCGGA ATCTGCCGCGAAGGGCGAATTCAACGGTACGCTCGACATTGCCAGCCGTGGCAAGGAGATGCCGGACTTCACCGTGACCG ACCCGTCCGGCAAGACGCTCAAGCTCCGCGATCTCAAGGGAACGCCGGTCCTCGTGAACCTCTGGGCAACCTGGTGCGGC CCCTGCGTCCTCGAAATGCCGATGCTCGACAAGCTGGCGGCGGACAACGACGGCAGGCTGCGCGTGCTCACGATCTCGCA GGACATCGAAGGCGCCGCCAAGGTTGCGCCCTTCTATGCCGAGCGGAAGTTCGCGAAACTGGAACCCTGGCTCGATCCCG AGAACAACCTCGGTTTTCACTATGAAACAGGAATGCTGCCGACGACCGTCCTCTACGACAAGGACGGCAAGGAAGTCTGG CGCATGATTGGCGCGCACGACTGGTCGGGGTCGAGAACGGCGGCGATGCTTGCCGAAACCCTCGGGAAGTAA
Upstream 100 bases:
>100_bases GGGACCGCCTGCGAAGCGCCCGCCCCACATCTGGTTGGAGCCCGAATTGCCGCTCATGTCCGTCCGCCCGTTCCCATTGT CGCCAAAATTGCTTCTGCTG
Downstream 100 bases:
>100_bases ACGCGAAATGGGGCGCGTCGAACGCGCCTTGCGCAAACATCGTTTGACATATCCCGCCGCGCCACTAGAGCGACCGGCGG GCCACGCGGTCCCAACGCCG
Product: thioredoxin family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MAALAVAGCDRQAAPDSQPQSSTAPAESAAKGEFNGTLDIASRGKEMPDFTVTDPSGKTLKLRDLKGTPVLVNLWATWCG PCVLEMPMLDKLAADNDGRLRVLTISQDIEGAAKVAPFYAERKFAKLEPWLDPENNLGFHYETGMLPTTVLYDKDGKEVW RMIGAHDWSGSRTAAMLAETLGK
Sequences:
>Translated_183_residues MAALAVAGCDRQAAPDSQPQSSTAPAESAAKGEFNGTLDIASRGKEMPDFTVTDPSGKTLKLRDLKGTPVLVNLWATWCG PCVLEMPMLDKLAADNDGRLRVLTISQDIEGAAKVAPFYAERKFAKLEPWLDPENNLGFHYETGMLPTTVLYDKDGKEVW RMIGAHDWSGSRTAAMLAETLGK >Mature_182_residues AALAVAGCDRQAAPDSQPQSSTAPAESAAKGEFNGTLDIASRGKEMPDFTVTDPSGKTLKLRDLKGTPVLVNLWATWCGP CVLEMPMLDKLAADNDGRLRVLTISQDIEGAAKVAPFYAERKFAKLEPWLDPENNLGFHYETGMLPTTVLYDKDGKEVWR MIGAHDWSGSRTAAMLAETLGK
Specific function: Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c; following this reduction heme can be covalent
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cell membrane; Single-pass type II membrane protein. Note=The thioredoxin-like motif is exposed on the outside of the membrane (By similarity) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: 1.8.1.8 [C]
Molecular weight: Translated: 19828; Mature: 19697
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAALAVAGCDRQAAPDSQPQSSTAPAESAAKGEFNGTLDIASRGKEMPDFTVTDPSGKTL CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCCCCEE KLRDLKGTPVLVNLWATWCGPCVLEMPMLDKLAADNDGRLRVLTISQDIEGAAKVAPFYA EEEECCCCCEEEEEHHHHHCHHEECCCHHHHHHCCCCCCEEEEEECCCCCCHHHHCHHHH ERKFAKLEPWLDPENNLGFHYETGMLPTTVLYDKDGKEVWRMIGAHDWSGSRTAAMLAET HHHHHHCCCCCCCCCCCCEEEECCCCCEEEEEECCHHHHHHHHCCCCCCCCHHHHHHHHH LGK HCC >Mature Secondary Structure AALAVAGCDRQAAPDSQPQSSTAPAESAAKGEFNGTLDIASRGKEMPDFTVTDPSGKTL CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCCCCEE KLRDLKGTPVLVNLWATWCGPCVLEMPMLDKLAADNDGRLRVLTISQDIEGAAKVAPFYA EEEECCCCCEEEEEHHHHHCHHEECCCHHHHHHCCCCCCEEEEEECCCCCCHHHHCHHHH ERKFAKLEPWLDPENNLGFHYETGMLPTTVLYDKDGKEVWRMIGAHDWSGSRTAAMLAET HHHHHHCCCCCCCCCCCCEEEECCCCCEEEEEECCHHHHHHHHCCCCCCCCHHHHHHHHH LGK HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA