Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200677

Identifier: 87200677

GI number: 87200677

Start: 2901927

End: 2903246

Strand: Reverse

Name: 87200677

Synonym: Saro_2664

Alternate gene names: NA

Gene position: 2903246-2901927 (Counterclockwise)

Preceding gene: 87200680

Following gene: 87200673

Centisome position: 81.52

GC content: 65.53

Gene sequence:

>1320_bases
ATGACGCCCACCTTCCAGACCCGCCCGATCCACCACCCCGCCCGCGACCAGGATCCCGCCATGTGGTGCGCGATCATTGC
GGCGGTGTTCTTCGTCGTCGTCCTCAATCGCCTTGGCATCCCGTCCAAGCCGATGTTCGACGAGATCCACTACCTGCCCG
CCGCGCGCCGGCTGATCGACCTCACCGCGCGGCTGAATCCCGAACACCCGCTGGTTGGGAAGCAGTTGATCGCCTGGTCG
ATGGAGTGGGTCGGGGATACCCCGTTCGGCTGGCGCTTCCCTTCGGCAGTGCTGGGCGCGCTGGGACTCTGGGCAATGAT
GCGCGGGCTGTGGTGGGCGAGCCTTTCGCGCAGCGCGACGATCCTGTTCGGTCTGCTGCTGGCGACGGACTTCGTCTGGT
TCATGATGTCGCGCATCGCGGTCCTCGACATGGCGATGGGCGGATTCATGGCGCTGGCCATGTGGCAATGGGCGCTGGCC
TGGCGCAATCCCACAGGCAGAGCGGGGCGGGCGCGGCTGCACCTCGTGTTGACCGGGCTGTTCATGGGCCTTTCGCTGGG
CGCCAAATGGAACGGCGTGCTGCTGCTGCCTCTGCCGGGCCTGCTGTTCGTGCTGAACCGCTGGCAATCGCTCAAGGGGC
GCCGTGCCGGCCTGCTGTGGTCATCGCGCGACGCGGGACCGGTGCCGGGCGTGTCGGTGATCGAGGCTGCACTTTGGCTC
GGCGTCCTGCCGGTGCTGGTCTATTTCGCCACCTTCCTGCCCGCCTTCTTCTACGAGAAGGACCCGCTCTCGGTCGGCAA
GCTGATCCACTGGCAAGAGTATATGCTCGAGCTCCAGGACAGCGTGAAGAAGCCGCACACCTACATGAGCCGCTGGTGGC
AGTGGATGGCGAACATCCGCCCGATCTGGTTCCTCTACGAGGTCGTCGACGGCGCGCAGCGCGGCGTTCTCATGCTGGGC
AATCCGTTCACCATGCTGGCGGGCCTGCCGGCGCTGCTGTTCTGCCTGTGGGACGGGGTGAAGGGCGACCGCCTGCGTTT
GCTGGTAGTTGCCGCCTATGCCCTGCTGGTGGGCTTCTGGGCAGTGAACGGCAAGCCGGTGCAATTCTACTACCACTACA
TGCTGGCGAGCTGCTTCCTGATGGCCGCGCTGGCGCTGGTCCTGGCGGAGTGGTGGGAGCTTGGCCTGCGCTGGCCCGCG
AAAGTGACCCTGGTCCTTTCGCTGGGCCTGTTCATCGGCTTCTACCCGATCATGTCGGCCGCAAAGCTGCCACGCAAGGA
TTCCTACCGGGACTACACCTGGCTCGATAGTTGGAAGTAG

Upstream 100 bases:

>100_bases
CCAGTCGTGCGTTTCATGGCGCTTGCCTTAGGCAGGCGCGGGTTTGCGTGCAAGCGGCGGGATTGCGGAGCGCCGGCGCG
CGCCCTATCCCTGCGCGGGC

Downstream 100 bases:

>100_bases
CCTGGGGCCAGGCTCATTACGCTCAGTACTTGCCCCAGACGAACTTGCTCGACAGCGCGAAGTTCCACACCGAGGCGAGG
ATGATGCCGGCGATTGCCGC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 438

Protein sequence:

>439_residues
MTPTFQTRPIHHPARDQDPAMWCAIIAAVFFVVVLNRLGIPSKPMFDEIHYLPAARRLIDLTARLNPEHPLVGKQLIAWS
MEWVGDTPFGWRFPSAVLGALGLWAMMRGLWWASLSRSATILFGLLLATDFVWFMMSRIAVLDMAMGGFMALAMWQWALA
WRNPTGRAGRARLHLVLTGLFMGLSLGAKWNGVLLLPLPGLLFVLNRWQSLKGRRAGLLWSSRDAGPVPGVSVIEAALWL
GVLPVLVYFATFLPAFFYEKDPLSVGKLIHWQEYMLELQDSVKKPHTYMSRWWQWMANIRPIWFLYEVVDGAQRGVLMLG
NPFTMLAGLPALLFCLWDGVKGDRLRLLVVAAYALLVGFWAVNGKPVQFYYHYMLASCFLMAALALVLAEWWELGLRWPA
KVTLVLSLGLFIGFYPIMSAAKLPRKDSYRDYTWLDSWK

Sequences:

>Translated_439_residues
MTPTFQTRPIHHPARDQDPAMWCAIIAAVFFVVVLNRLGIPSKPMFDEIHYLPAARRLIDLTARLNPEHPLVGKQLIAWS
MEWVGDTPFGWRFPSAVLGALGLWAMMRGLWWASLSRSATILFGLLLATDFVWFMMSRIAVLDMAMGGFMALAMWQWALA
WRNPTGRAGRARLHLVLTGLFMGLSLGAKWNGVLLLPLPGLLFVLNRWQSLKGRRAGLLWSSRDAGPVPGVSVIEAALWL
GVLPVLVYFATFLPAFFYEKDPLSVGKLIHWQEYMLELQDSVKKPHTYMSRWWQWMANIRPIWFLYEVVDGAQRGVLMLG
NPFTMLAGLPALLFCLWDGVKGDRLRLLVVAAYALLVGFWAVNGKPVQFYYHYMLASCFLMAALALVLAEWWELGLRWPA
KVTLVLSLGLFIGFYPIMSAAKLPRKDSYRDYTWLDSWK
>Mature_438_residues
TPTFQTRPIHHPARDQDPAMWCAIIAAVFFVVVLNRLGIPSKPMFDEIHYLPAARRLIDLTARLNPEHPLVGKQLIAWSM
EWVGDTPFGWRFPSAVLGALGLWAMMRGLWWASLSRSATILFGLLLATDFVWFMMSRIAVLDMAMGGFMALAMWQWALAW
RNPTGRAGRARLHLVLTGLFMGLSLGAKWNGVLLLPLPGLLFVLNRWQSLKGRRAGLLWSSRDAGPVPGVSVIEAALWLG
VLPVLVYFATFLPAFFYEKDPLSVGKLIHWQEYMLELQDSVKKPHTYMSRWWQWMANIRPIWFLYEVVDGAQRGVLMLGN
PFTMLAGLPALLFCLWDGVKGDRLRLLVVAAYALLVGFWAVNGKPVQFYYHYMLASCFLMAALALVLAEWWELGLRWPAK
VTLVLSLGLFIGFYPIMSAAKLPRKDSYRDYTWLDSWK

Specific function: Unknown

COG id: COG1928

COG function: function code O; Dolichyl-phosphate-mannose--protein O-mannosyl transferase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 39 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003342 [H]

Pfam domain/function: PF02366 PMT [H]

EC number: NA

Molecular weight: Translated: 49936; Mature: 49805

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPTFQTRPIHHPARDQDPAMWCAIIAAVFFVVVLNRLGIPSKPMFDEIHYLPAARRLID
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
LTARLNPEHPLVGKQLIAWSMEWVGDTPFGWRFPSAVLGALGLWAMMRGLWWASLSRSAT
HHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH
ILFGLLLATDFVWFMMSRIAVLDMAMGGFMALAMWQWALAWRNPTGRAGRARLHLVLTGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
FMGLSLGAKWNGVLLLPLPGLLFVLNRWQSLKGRRAGLLWSSRDAGPVPGVSVIEAALWL
HHHHHCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCHHHHHHHHHH
GVLPVLVYFATFLPAFFYEKDPLSVGKLIHWQEYMLELQDSVKKPHTYMSRWWQWMANIR
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
PIWFLYEVVDGAQRGVLMLGNPFTMLAGLPALLFCLWDGVKGDRLRLLVVAAYALLVGFW
HHHHHHHHHCCHHCCEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
AVNGKPVQFYYHYMLASCFLMAALALVLAEWWELGLRWPAKVTLVLSLGLFIGFYPIMSA
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
AKLPRKDSYRDYTWLDSWK
HCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TPTFQTRPIHHPARDQDPAMWCAIIAAVFFVVVLNRLGIPSKPMFDEIHYLPAARRLID
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
LTARLNPEHPLVGKQLIAWSMEWVGDTPFGWRFPSAVLGALGLWAMMRGLWWASLSRSAT
HHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH
ILFGLLLATDFVWFMMSRIAVLDMAMGGFMALAMWQWALAWRNPTGRAGRARLHLVLTGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
FMGLSLGAKWNGVLLLPLPGLLFVLNRWQSLKGRRAGLLWSSRDAGPVPGVSVIEAALWL
HHHHHCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCHHHHHHHHHH
GVLPVLVYFATFLPAFFYEKDPLSVGKLIHWQEYMLELQDSVKKPHTYMSRWWQWMANIR
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
PIWFLYEVVDGAQRGVLMLGNPFTMLAGLPALLFCLWDGVKGDRLRLLVVAAYALLVGFW
HHHHHHHHHCCHHCCEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
AVNGKPVQFYYHYMLASCFLMAALALVLAEWWELGLRWPAKVTLVLSLGLFIGFYPIMSA
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
AKLPRKDSYRDYTWLDSWK
HCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]