| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
Click here to switch to the map view.
The map label for this gene is rimL [C]
Identifier: 87200646
GI number: 87200646
Start: 2870264
End: 2870740
Strand: Reverse
Name: rimL [C]
Synonym: Saro_2633
Alternate gene names: 87200646
Gene position: 2870740-2870264 (Counterclockwise)
Preceding gene: 87200647
Following gene: 87200645
Centisome position: 80.6
GC content: 65.41
Gene sequence:
>477_bases GTGACGGTCAGGCTGGTCCCGGCCACGAATGAGCACTTCGCGCGAATACTGGCGGGGGAGAGGCCGGACGCAGGCGTGGC TCCGCCTGATACTCCGGTGGCGGAACCGGAGGTGCTGGCCATGCTGGCGGGACTGGCCGGCCAGATTGCAGAGGCATTTT CGCCTGCTGCCTGGCTGATTGTGGCGGATGACCAACTGGTGGGACTGCTGTCGGTCACTGCCGTTCCAGATGATGGCAGG TTGCAGATCGGGTACGGCATCGCGCCGGGCGCGCAGGGACGTGGTCATGCTACGGCAGCGGTCGCGGCGTTGCGCGAATG GGCCTTGCGCGACCATCGCCTGCGCGCTCTCCTTGCCGAGACGCGGACGGACAACATCGCCTCACAACGGGTGCTTGAGC GCAACGGCTTCGTGAAGATCGGCGAACGACTTGACGAAGAGGACGGCGCGCTCTTCTGTTGGCAAGCCGATTGTTGA
Upstream 100 bases:
>100_bases CCGAGGATCGCGCGGGCGAGACCGTCATGGTGGACGAGGCCTACGTGGCCGACAAGCTGGCCAACCTTGCCGGCAACGCG GATCTTTCGAAGTACATCCT
Downstream 100 bases:
>100_bases GGAAGCCGATGTACCAGACACCCGAAGACCGCCCGATCTACCGCCTTCTCACCGGCAAGGATGACCGTGCCTTCTGCGAG CGCGTGTCGGAAGCGCTGGC
Product: GCN5-like N-acetyltransferase
Products: CoA; Ribosomal-Protein N-Acetyl-L-Serine. [C]
Alternate protein names: Acetyltransferase; GCN5-Like N-Acetyltransferase; Acetyltransferase Protein
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MTVRLVPATNEHFARILAGERPDAGVAPPDTPVAEPEVLAMLAGLAGQIAEAFSPAAWLIVADDQLVGLLSVTAVPDDGR LQIGYGIAPGAQGRGHATAAVAALREWALRDHRLRALLAETRTDNIASQRVLERNGFVKIGERLDEEDGALFCWQADC
Sequences:
>Translated_158_residues MTVRLVPATNEHFARILAGERPDAGVAPPDTPVAEPEVLAMLAGLAGQIAEAFSPAAWLIVADDQLVGLLSVTAVPDDGR LQIGYGIAPGAQGRGHATAAVAALREWALRDHRLRALLAETRTDNIASQRVLERNGFVKIGERLDEEDGALFCWQADC >Mature_157_residues TVRLVPATNEHFARILAGERPDAGVAPPDTPVAEPEVLAMLAGLAGQIAEAFSPAAWLIVADDQLVGLLSVTAVPDDGRL QIGYGIAPGAQGRGHATAAVAALREWALRDHRLRALLAETRTDNIASQRVLERNGFVKIGERLDEEDGALFCWQADC
Specific function: This Enzyme Acetylates The N-Terminal Serine Of Ribosomal Protein L7/L12. [C]
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.- [C]
Molecular weight: Translated: 16815; Mature: 16684
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVRLVPATNEHFARILAGERPDAGVAPPDTPVAEPEVLAMLAGLAGQIAEAFSPAAWLI CEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEE VADDQLVGLLSVTAVPDDGRLQIGYGIAPGAQGRGHATAAVAALREWALRDHRLRALLAE EECCCEEEEEEEEECCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH TRTDNIASQRVLERNGFVKIGERLDEEDGALFCWQADC HCCCHHHHHHHHHCCCCEEECCCCCCCCCEEEEEECCC >Mature Secondary Structure TVRLVPATNEHFARILAGERPDAGVAPPDTPVAEPEVLAMLAGLAGQIAEAFSPAAWLI EEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEE VADDQLVGLLSVTAVPDDGRLQIGYGIAPGAQGRGHATAAVAALREWALRDHRLRALLAE EECCCEEEEEEEEECCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH TRTDNIASQRVLERNGFVKIGERLDEEDGALFCWQADC HCCCHHHHHHHHHCCCCEEECCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Acetyl-CoA; Ribosomal-Protein L-Serine [C]
Specific reaction: Acetyl-CoA + Ribosomal-Protein L-Serine = CoA + Ribosomal-Protein N-Acetyl-L-Serine. [C]
General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA