Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is yghU [H]

Identifier: 87200608

GI number: 87200608

Start: 2803495

End: 2804361

Strand: Direct

Name: yghU [H]

Synonym: Saro_2595

Alternate gene names: 87200608

Gene position: 2803495-2804361 (Clockwise)

Preceding gene: 87200606

Following gene: 87200609

Centisome position: 78.71

GC content: 63.44

Gene sequence:

>867_bases
ATGTCCTCAGAGTACGTTCCCCCGAAGGTCTGGAAGTGGGACAAGGCCAACGGCGGCGCCTTCGCCAGCGTCAACCGCCC
AGTCGCCGGCCCGACGAGCGAGCGCGAACTGCCGGTCGGCAAGCATCCTTTCCAGGTCTATTCGCTCGGCACGCCCAACG
GGCAGAAGGCCACGATCATGCTGGAAGAACTGCTCCAGCTGGGCTTTTCCGAGGCCGAGTACGACGCCTGGCTGATCAAG
ATCTTCGAAGGCGACCAGTTCACCAGCGGCTTCGTCGACATCAATCCGAACTCCAAGATCCCGGCCATGGTCGACCGCTC
GGGCCCTGAACCGTTCCGCGTCTTCGAATCCGGCGCCATTCTGATGCACCTTGCTGAAAAGTTTGGCGTTTTCCTGCCAA
CTTCCGGCCCCGCCCGCGCCGAGTGCCTATCCTGGCTGTTCTGGCAGGTCGGCTCCGCCCCGTTCATCGGCGGCGGCTTC
GGCCACTTCTACAACTACGCCCCGATCAAGATCGAGTACGCGATCGATCGCTATGCCATGGAAACCAAGCGCCTTTTCGA
CGTGGCCAACCGTCGCCTCGCGGAAAGCCGCTATCTTGCGGGGGACGAATACACGATCGCCGACCTTGCCACCTACACCT
GGTTCGGCAACATCTACCGCGGCGAAGCCTACGGCGAGGCGGCGACCTTCCTGTCGATGCACGAATACGAACACGTCGGC
CGCTGGGTCGGCGAGATCGACGCGAGGCCGGGGGTGCTGCGGGGGCGGTTGGTGAACTCCAGCAAGGGCCTGGCAGAGCG
TCACGACGCGAGCGATTTCGACGCCCTCCCGCCGGAATCGTTGCAAGCGATCGTCAAGGGCTTCTGA

Upstream 100 bases:

>100_bases
CTGTCCATCATCCACGCGAACGGACCGGAAGCCCTTGCGGTTCCGTGCCCAACGCTTCAATATAGTGTGCAACACTAACA
ATATCCCCAAGGAGCAGGCG

Downstream 100 bases:

>100_bases
ACCCGCCTCGAGACCGGCGAACGACACCTTGGGGACCCTCGTGTCACTTTAGGTGTCGTTCAGGTCACCCCTTTTCAACG
CCGTTTCCCGCGCTATAAGC

Product: putative glutathione S-transferase YghU

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MSSEYVPPKVWKWDKANGGAFASVNRPVAGPTSERELPVGKHPFQVYSLGTPNGQKATIMLEELLQLGFSEAEYDAWLIK
IFEGDQFTSGFVDINPNSKIPAMVDRSGPEPFRVFESGAILMHLAEKFGVFLPTSGPARAECLSWLFWQVGSAPFIGGGF
GHFYNYAPIKIEYAIDRYAMETKRLFDVANRRLAESRYLAGDEYTIADLATYTWFGNIYRGEAYGEAATFLSMHEYEHVG
RWVGEIDARPGVLRGRLVNSSKGLAERHDASDFDALPPESLQAIVKGF

Sequences:

>Translated_288_residues
MSSEYVPPKVWKWDKANGGAFASVNRPVAGPTSERELPVGKHPFQVYSLGTPNGQKATIMLEELLQLGFSEAEYDAWLIK
IFEGDQFTSGFVDINPNSKIPAMVDRSGPEPFRVFESGAILMHLAEKFGVFLPTSGPARAECLSWLFWQVGSAPFIGGGF
GHFYNYAPIKIEYAIDRYAMETKRLFDVANRRLAESRYLAGDEYTIADLATYTWFGNIYRGEAYGEAATFLSMHEYEHVG
RWVGEIDARPGVLRGRLVNSSKGLAERHDASDFDALPPESLQAIVKGF
>Mature_287_residues
SSEYVPPKVWKWDKANGGAFASVNRPVAGPTSERELPVGKHPFQVYSLGTPNGQKATIMLEELLQLGFSEAEYDAWLIKI
FEGDQFTSGFVDINPNSKIPAMVDRSGPEPFRVFESGAILMHLAEKFGVFLPTSGPARAECLSWLFWQVGSAPFIGGGFG
HFYNYAPIKIEYAIDRYAMETKRLFDVANRRLAESRYLAGDEYTIADLATYTWFGNIYRGEAYGEAATFLSMHEYEHVGR
WVGEIDARPGVLRGRLVNSSKGLAERHDASDFDALPPESLQAIVKGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GST N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI87082195, Length=286, Percent_Identity=61.1888111888112, Blast_Score=370, Evalue=1e-104,
Organism=Escherichia coli, GI1788640, Length=232, Percent_Identity=42.2413793103448, Blast_Score=152, Evalue=4e-38,
Organism=Saccharomyces cerevisiae, GI6324100, Length=260, Percent_Identity=28.8461538461538, Blast_Score=92, Evalue=1e-19,
Organism=Drosophila melanogaster, GI28571670, Length=177, Percent_Identity=25.9887005649718, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010987
- InterPro:   IPR004045
- InterPro:   IPR017933
- InterPro:   IPR004046
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]

EC number: NA

Molecular weight: Translated: 32083; Mature: 31951

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSEYVPPKVWKWDKANGGAFASVNRPVAGPTSERELPVGKHPFQVYSLGTPNGQKATIM
CCCCCCCCCCEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEHHH
LEELLQLGFSEAEYDAWLIKIFEGDQFTSGFVDINPNSKIPAMVDRSGPEPFRVFESGAI
HHHHHHCCCCCCCCCEEEEEEEECCCCCCCEEEECCCCCCCEEEECCCCCCEEHHCCCHH
LMHLAEKFGVFLPTSGPARAECLSWLFWQVGSAPFIGGGFGHFYNYAPIKIEYAIDRYAM
HHHHHHHCCEEECCCCCHHHHHHHHHHHHHCCCCEECCCHHHHCCCCCEEEEEEHHHHHH
ETKRLFDVANRRLAESRYLAGDEYTIADLATYTWFGNIYRGEAYGEAATFLSMHEYEHVG
HHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHH
RWVGEIDARPGVLRGRLVNSSKGLAERHDASDFDALPPESLQAIVKGF
HHHHHCCCCCCEEEEEEECCCCCCHHHCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
SSEYVPPKVWKWDKANGGAFASVNRPVAGPTSERELPVGKHPFQVYSLGTPNGQKATIM
CCCCCCCCCEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEHHH
LEELLQLGFSEAEYDAWLIKIFEGDQFTSGFVDINPNSKIPAMVDRSGPEPFRVFESGAI
HHHHHHCCCCCCCCCEEEEEEEECCCCCCCEEEECCCCCCCEEEECCCCCCEEHHCCCHH
LMHLAEKFGVFLPTSGPARAECLSWLFWQVGSAPFIGGGFGHFYNYAPIKIEYAIDRYAM
HHHHHHHCCEEECCCCCHHHHHHHHHHHHHCCCCEECCCHHHHCCCCCEEEEEEHHHHHH
ETKRLFDVANRRLAESRYLAGDEYTIADLATYTWFGNIYRGEAYGEAATFLSMHEYEHVG
HHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHH
RWVGEIDARPGVLRGRLVNSSKGLAERHDASDFDALPPESLQAIVKGF
HHHHHCCCCCCEEEEEEECCCCCCHHHCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]