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The map label for this gene is cspG [C]

Identifier: 87200599

GI number: 87200599

Start: 2791529

End: 2791735

Strand: Reverse

Name: cspG [C]

Synonym: Saro_2586

Alternate gene names: 87200599

Gene position: 2791735-2791529 (Counterclockwise)

Preceding gene: 87200600

Following gene: 87200598

Centisome position: 78.38

GC content: 59.42

Gene sequence:

>207_bases
ATGCCAGTAGGCACCGTAAAGTTCTTCAATGTCGACAAGGGTTATGGCTTCATCGCTCCTGATGGCGGCGCTCCGGACAA
CTTCGTCCACATCAGCGCTGTCGAGCGTTCGGGCATGGCTACCCTCGACAAGGACCAGCGCGTCCAATACGAGCTGGAAA
CCGACAAGCGCGGCAAGACCAGCGCCGTCAACCTCCAGTCGGCCTGA

Upstream 100 bases:

>100_bases
GGAATTTGCGGCCTCAGGCTGTTCCTTCCTTTCACACGCTACAAGCCCCGACGCCGGATCCGGTGGCGGGTCATTTCTGT
TTTCGTGAAAGGAAACACCC

Downstream 100 bases:

>100_bases
CACGATGGCAAAGGAGGATCTCCTGACCCTCGAAGGGGTGATCGACGAGATCCTCCCCGATGGCCGTTTTGGCGTCATGC
TCGAAAACGGCCATCGCATC

Product: cold-shock DNA-binding protein family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 68; Mature: 67

Protein sequence:

>68_residues
MPVGTVKFFNVDKGYGFIAPDGGAPDNFVHISAVERSGMATLDKDQRVQYELETDKRGKTSAVNLQSA

Sequences:

>Translated_68_residues
MPVGTVKFFNVDKGYGFIAPDGGAPDNFVHISAVERSGMATLDKDQRVQYELETDKRGKTSAVNLQSA
>Mature_67_residues
PVGTVKFFNVDKGYGFIAPDGGAPDNFVHISAVERSGMATLDKDQRVQYELETDKRGKTSAVNLQSA

Specific function: Unknown

COG id: COG1278

COG function: function code K; Cold shock proteins

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CSD (cold-shock) domain [H]

Homologues:

Organism=Escherichia coli, GI2367114, Length=59, Percent_Identity=45.7627118644068, Blast_Score=66, Evalue=4e-13,
Organism=Escherichia coli, GI1789979, Length=56, Percent_Identity=48.2142857142857, Blast_Score=65, Evalue=1e-12,
Organism=Escherichia coli, GI1786841, Length=59, Percent_Identity=45.7627118644068, Blast_Score=63, Evalue=3e-12,
Organism=Escherichia coli, GI1787107, Length=63, Percent_Identity=42.8571428571429, Blast_Score=59, Evalue=6e-11,
Organism=Escherichia coli, GI1788126, Length=62, Percent_Identity=45.1612903225806, Blast_Score=59, Evalue=6e-11,
Organism=Escherichia coli, GI1787839, Length=59, Percent_Identity=44.0677966101695, Blast_Score=58, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019844
- InterPro:   IPR012156
- InterPro:   IPR011129
- InterPro:   IPR002059
- InterPro:   IPR012340
- InterPro:   IPR016027 [H]

Pfam domain/function: PF00313 CSD [H]

EC number: NA

Molecular weight: Translated: 7376; Mature: 7245

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVGTVKFFNVDKGYGFIAPDGGAPDNFVHISAVERSGMATLDKDQRVQYELETDKRGKT
CCCCCEEEEECCCCCEEEECCCCCCCCEEEEEEECCCCCEEECCCCEEEEEECCCCCCCE
SAVNLQSA
EEEEEECC
>Mature Secondary Structure 
PVGTVKFFNVDKGYGFIAPDGGAPDNFVHISAVERSGMATLDKDQRVQYELETDKRGKT
CCCCEEEEECCCCCEEEECCCCCCCCEEEEEEECCCCCEEECCCCEEEEEECCCCCCCE
SAVNLQSA
EEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]