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The map label for this gene is fixN [H]

Identifier: 87200591

GI number: 87200591

Start: 2781217

End: 2782863

Strand: Reverse

Name: fixN [H]

Synonym: Saro_2578

Alternate gene names: 87200591

Gene position: 2782863-2781217 (Counterclockwise)

Preceding gene: 87200594

Following gene: 87200590

Centisome position: 78.14

GC content: 63.75

Gene sequence:

>1647_bases
ATGGAATCGGCACTATCGCGCACGGGCTTGTGGCTCGTGGCGCTTCTTTTCGCCGTCGTCGCCTGCGCCGCAGCCGTCGA
CACTGGTTTCGCGATCCACATGGGCATCGTTGCACTGGCCTGCATCATCGGGCTGACGGTGACGCTGCGCGGGGTGGATC
TGCACAAGGCCATCCTCGCGCCCGATCAGGGCCGCTATGATGACGACGTGATCCGCTGGGGCGTGATCGCGACCGTCTTC
TGGGGCATGGCGGGCTTCCTTGCGGGGCTCTTCATCGCGCTGCAACTGGCCATGCCGGTGCTGAACCTCGGTCTGGAATG
GACCGCGTTCGGCCGCATGCGCCCGCTGCATACGTCCGCGGTCATCTTCGCTTTCGGAGGCAACGCGCTGATCGCCACGT
CGTTCTACGTCGTGCAGCGTACTTGCCGGGCGAGGCTGGCCTTCCCCGGCCTCGCCCGTTTCGTGTTCTGGGGTTACCAG
CTCTTCATCGTGCTGGCCGCCACAGGCTATCTGCTCGGGATCACCCAGGGGAAGGAATACGCCGAGCCCGAATGGTACGT
CGACCTCTGGCTGACGGTCGTCTGGGTCGCATACCTCGCGGTCTTCGTCGGCACGATTGTCAAGCGGACCGAACCGCACA
TCTACGTCGCCAACTGGTTCTACCTGTCGTTCATCATCACTGTTGCGATGCTCCACATCGTCAACAACCTGAACTGGCCG
GTAAGCTTCTTCGGCAGCCGCAGCTATCCGATCTTCGCGGGCGTGCAGGGCGCGCTGGTGCAGTGGTGGTACGGCCACAA
CGCGGTGGGCTTCTTCCTGACCGCCGGCTTCCTGGCGATGATGTACTACTTCGTACCCAAGCAGGCCGAACGTCCGATCT
ATTCCTACCGCCTGTCGATCATCCACTTCTGGGCGCTGATCTTCCTCTACATCTGGGCGGGTCCGCACCATCTCCACTAC
ACCGCGCTGCCCGACTGGGCGCAGACGCTGGGCATGGTCTTCTCGGTCATGCTGTGGATGCCGAGCTGGGGTGGCATGAT
CAACGGCCTGATGACGCTCAACGGTGCGTGGGACAAGGTCCGCACCGACCCGATCATTCGCATGATGGTCATGGCGCTGG
CCTTCTACGGCATGAGCACCTTCGAAGGCCCGATGATGTCGATCAAATCGGTCAACAGCCTGTCGCATTATACCGACTGG
ACCATCGGCCACGTCCACTCCGGCGCGCTCGGCTGGAACGGCATGATCACCTTCGCCGCAGTCTACTATCTCGTGCCGCG
CCTGTGGAACCGCCCGCGCCTCTACAGCCTGCGCATGGTCAACTGGCACTTCTGGCTCGCGACGGTGGGCATCGTCTTCT
ACGCCGCCTCGATGTGGGTCGCCGGCATCATGCAGGGCCTGATGTGGCGTGAATACGGCGCCGACGGCTACCTCGTGAAC
AGCTTCGCCGAGACCGTCCTGGCGCTGAAGCCGATGTTCTTCCTGCGCGCCTTCGGCGGCCTGCTCTACCTCGCCGGCGC
CGTGGTGATGACGGTCAACGTCTGGCGCACGATCCTTGGCCACCTGCGCGAGGAAGCGCCGATGCGCGACGCCGCCTTCG
ATCCCGAAAAGGATCGTCCGGTCATCGCCGCCCCGGCTGCAGCCTGA

Upstream 100 bases:

>100_bases
AGTATGAGACAAGTCGTTGACCCTATTTGACAAGGGTCAATGTTCCAGGCCCCAGGGGGGTGCAGCGCGGGATCACAACT
CGCATGGAAGGGAAGGCTCC

Downstream 100 bases:

>100_bases
TCCAAGACGCTCTGGAGAAAATCCCATGACCACCATCGTGGAACGCCACAAGAAACTGGAGCGCAACGTGACCCTCCTCG
GCATCGCGGCCTTTGCCGCG

Product: cbb3-type cytochrome c oxidase subunit I

Products: NA

Alternate protein names: Cytochrome CBB3 subunit 1; Cytochrome c oxidase polypeptide I homolog; Heme B/copper cytochrome c oxidase subunit [H]

Number of amino acids: Translated: 548; Mature: 548

Protein sequence:

>548_residues
MESALSRTGLWLVALLFAVVACAAAVDTGFAIHMGIVALACIIGLTVTLRGVDLHKAILAPDQGRYDDDVIRWGVIATVF
WGMAGFLAGLFIALQLAMPVLNLGLEWTAFGRMRPLHTSAVIFAFGGNALIATSFYVVQRTCRARLAFPGLARFVFWGYQ
LFIVLAATGYLLGITQGKEYAEPEWYVDLWLTVVWVAYLAVFVGTIVKRTEPHIYVANWFYLSFIITVAMLHIVNNLNWP
VSFFGSRSYPIFAGVQGALVQWWYGHNAVGFFLTAGFLAMMYYFVPKQAERPIYSYRLSIIHFWALIFLYIWAGPHHLHY
TALPDWAQTLGMVFSVMLWMPSWGGMINGLMTLNGAWDKVRTDPIIRMMVMALAFYGMSTFEGPMMSIKSVNSLSHYTDW
TIGHVHSGALGWNGMITFAAVYYLVPRLWNRPRLYSLRMVNWHFWLATVGIVFYAASMWVAGIMQGLMWREYGADGYLVN
SFAETVLALKPMFFLRAFGGLLYLAGAVVMTVNVWRTILGHLREEAPMRDAAFDPEKDRPVIAAPAAA

Sequences:

>Translated_548_residues
MESALSRTGLWLVALLFAVVACAAAVDTGFAIHMGIVALACIIGLTVTLRGVDLHKAILAPDQGRYDDDVIRWGVIATVF
WGMAGFLAGLFIALQLAMPVLNLGLEWTAFGRMRPLHTSAVIFAFGGNALIATSFYVVQRTCRARLAFPGLARFVFWGYQ
LFIVLAATGYLLGITQGKEYAEPEWYVDLWLTVVWVAYLAVFVGTIVKRTEPHIYVANWFYLSFIITVAMLHIVNNLNWP
VSFFGSRSYPIFAGVQGALVQWWYGHNAVGFFLTAGFLAMMYYFVPKQAERPIYSYRLSIIHFWALIFLYIWAGPHHLHY
TALPDWAQTLGMVFSVMLWMPSWGGMINGLMTLNGAWDKVRTDPIIRMMVMALAFYGMSTFEGPMMSIKSVNSLSHYTDW
TIGHVHSGALGWNGMITFAAVYYLVPRLWNRPRLYSLRMVNWHFWLATVGIVFYAASMWVAGIMQGLMWREYGADGYLVN
SFAETVLALKPMFFLRAFGGLLYLAGAVVMTVNVWRTILGHLREEAPMRDAAFDPEKDRPVIAAPAAA
>Mature_548_residues
MESALSRTGLWLVALLFAVVACAAAVDTGFAIHMGIVALACIIGLTVTLRGVDLHKAILAPDQGRYDDDVIRWGVIATVF
WGMAGFLAGLFIALQLAMPVLNLGLEWTAFGRMRPLHTSAVIFAFGGNALIATSFYVVQRTCRARLAFPGLARFVFWGYQ
LFIVLAATGYLLGITQGKEYAEPEWYVDLWLTVVWVAYLAVFVGTIVKRTEPHIYVANWFYLSFIITVAMLHIVNNLNWP
VSFFGSRSYPIFAGVQGALVQWWYGHNAVGFFLTAGFLAMMYYFVPKQAERPIYSYRLSIIHFWALIFLYIWAGPHHLHY
TALPDWAQTLGMVFSVMLWMPSWGGMINGLMTLNGAWDKVRTDPIIRMMVMALAFYGMSTFEGPMMSIKSVNSLSHYTDW
TIGHVHSGALGWNGMITFAAVYYLVPRLWNRPRLYSLRMVNWHFWLATVGIVFYAASMWVAGIMQGLMWREYGADGYLVN
SFAETVLALKPMFFLRAFGGLLYLAGAVVMTVNVWRTILGHLREEAPMRDAAFDPEKDRPVIAAPAAA

Specific function: Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Co I is the catalytic subunit of the enzyme. Electrons originating in cytochrome

COG id: COG3278

COG function: function code O; Cbb3-type cytochrome oxidase, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heme-copper respiratory oxidase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004677
- InterPro:   IPR000883 [H]

Pfam domain/function: PF00115 COX1 [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 61556; Mature: 61556

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50855 COX1 ; PS00077 COX1_CUB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESALSRTGLWLVALLFAVVACAAAVDTGFAIHMGIVALACIIGLTVTLRGVDLHKAILA
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEECCHHHHHHCC
PDQGRYDDDVIRWGVIATVFWGMAGFLAGLFIALQLAMPVLNLGLEWTAFGRMRPLHTSA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCE
VIFAFGGNALIATSFYVVQRTCRARLAFPGLARFVFWGYQLFIVLAATGYLLGITQGKEY
EEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC
AEPEWYVDLWLTVVWVAYLAVFVGTIVKRTEPHIYVANWFYLSFIITVAMLHIVNNLNWP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCC
VSFFGSRSYPIFAGVQGALVQWWYGHNAVGFFLTAGFLAMMYYFVPKQAERPIYSYRLSI
CEECCCCCCCEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
IHFWALIFLYIWAGPHHLHYTALPDWAQTLGMVFSVMLWMPSWGGMINGLMTLNGAWDKV
HHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHEECCCCHHH
RTDPIIRMMVMALAFYGMSTFEGPMMSIKSVNSLSHYTDWTIGHVHSGALGWNGMITFAA
CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHH
VYYLVPRLWNRPRLYSLRMVNWHFWLATVGIVFYAASMWVAGIMQGLMWREYGADGYLVN
HHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHH
SFAETVLALKPMFFLRAFGGLLYLAGAVVMTVNVWRTILGHLREEAPMRDAAFDPEKDRP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
VIAAPAAA
EEECCCCC
>Mature Secondary Structure
MESALSRTGLWLVALLFAVVACAAAVDTGFAIHMGIVALACIIGLTVTLRGVDLHKAILA
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEECCHHHHHHCC
PDQGRYDDDVIRWGVIATVFWGMAGFLAGLFIALQLAMPVLNLGLEWTAFGRMRPLHTSA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCE
VIFAFGGNALIATSFYVVQRTCRARLAFPGLARFVFWGYQLFIVLAATGYLLGITQGKEY
EEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC
AEPEWYVDLWLTVVWVAYLAVFVGTIVKRTEPHIYVANWFYLSFIITVAMLHIVNNLNWP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCC
VSFFGSRSYPIFAGVQGALVQWWYGHNAVGFFLTAGFLAMMYYFVPKQAERPIYSYRLSI
CEECCCCCCCEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
IHFWALIFLYIWAGPHHLHYTALPDWAQTLGMVFSVMLWMPSWGGMINGLMTLNGAWDKV
HHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHEECCCCHHH
RTDPIIRMMVMALAFYGMSTFEGPMMSIKSVNSLSHYTDWTIGHVHSGALGWNGMITFAA
CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHH
VYYLVPRLWNRPRLYSLRMVNWHFWLATVGIVFYAASMWVAGIMQGLMWREYGADGYLVN
HHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHH
SFAETVLALKPMFFLRAFGGLLYLAGAVVMTVNVWRTILGHLREEAPMRDAAFDPEKDRP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
VIAAPAAA
EEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]